Pairwise Alignments

Query, 546 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 530 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  469 bits (1208), Expect = e-137
 Identities = 270/541 (49%), Positives = 357/541 (65%), Gaps = 22/541 (4%)

Query: 12  LIDVKGLRVAFG----GKEVVHGIDFQIAAGEKLALVGESGSGKTVTALSLLRLVQNADV 67
           ++ +  L V FG     + V  G+   IA GE LALVGESGSGK+VTA ++LRL+     
Sbjct: 5   VLKIDNLSVGFGIAGQARPVTEGVSLTIARGETLALVGESGSGKSVTANAILRLLPK--- 61

Query: 68  TGEARLYGAERQQAPRDLLSIPERELRGIRGKEIAMIFQEPMTALNALYSVGDQIAEVLE 127
            G A            D L   ER LRGIRG  I MIFQEPM +LN L+ +G Q+ E L 
Sbjct: 62  -GSAHYLSGSIHFGDVDTLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVETLA 120

Query: 128 LHEALSARAAQAAAVQLLADTGIPEPARRARAFPHQLSGGQRQRAMIAMALACKPRLLLA 187
           +H  L A AA+  A++ L   GI  P  +  A+PH+LSGG+RQR MIAMAL  +P LL+A
Sbjct: 121 IHRGLRATAAEQKAIEWLGKVGIRHPEIKINAYPHELSGGERQRVMIAMALINEPELLIA 180

Query: 188 DEPTTALDVTVRAQILDLLADLQHKYGMAVLLITHDLNLVRRFADRVVVMENGHVVEHGA 247
           DEPTTALDV+V+AQILDLL  LQ + GMA+L ITHDL++VRR ADRV VM++G +VE  A
Sbjct: 181 DEPTTALDVSVQAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQLVETNA 240

Query: 248 VAPVFDAPQHPYTRKLIDSHPTRDVAAVQASPAAVPVLEAKALRVIYPVPKPGIGGWFRK 307
              +F AP HPYT++LI++ P R V    A  A   +L+A+ LRV +P+     GG+FR+
Sbjct: 241 CHTLFAAPAHPYTQQLINADP-RGVPVPTAMDAPT-LLQAEKLRVWFPIK----GGYFRR 294

Query: 308 GE--FVAVQGADFRIVPGETLGVVGESGSGKSTLALAALGLLKHQGALKIAGKD-WAVDR 364
            +    AV    F +  G++LG+VGESGSGKST  +A L LL  QGA++ AG+D  A+ R
Sbjct: 295 TQAYIKAVTDMSFTLAKGQSLGLVGESGSGKSTTGMAILKLLASQGAIRFAGQDLQALKR 354

Query: 365 ASDLGLRRVMQVVFQDPFSSLSPRMTVEQIVGEGLRVHAPELGVEARRARSLAALADVGL 424
              L  R  MQVVFQDP+S+L+PRM+V Q++GEGLRVH+ +L  +       A + +VGL
Sbjct: 355 REMLPYRSKMQVVFQDPYSALNPRMSVAQVIGEGLRVHS-QLNDDEIDHAICAVMQEVGL 413

Query: 425 TESQFPSLLDRYPHEFSGGQRQRLAIARALIVDPQLLVLDEPTSALDVTIQKQVLGLLQR 484
                     RYP+EFSGGQRQR+AIARAL++ P+ ++LDEPTS+LD T+Q QVL LL+ 
Sbjct: 414 D----VDTRHRYPNEFSGGQRQRIAIARALVLKPEFILLDEPTSSLDRTVQAQVLDLLKD 469

Query: 485 LQRERGLSYLLITHDVEVIRAMAHQVIVMKDGAILETGPVERVLGAPEHPYTKKLVAAAL 544
           LQ++  L+YL I+HD+ VIRA+ H  IVMK G I+E G  + +   P HPYT++LV  +L
Sbjct: 470 LQQKYQLTYLFISHDLAVIRALCHHTIVMKAGEIVEHGETQSLFENPSHPYTQQLVRLSL 529

Query: 545 L 545
           L
Sbjct: 530 L 530