Pairwise Alignments

Query, 546 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 571 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  355 bits (912), Expect = e-102
 Identities = 220/566 (38%), Positives = 320/566 (56%), Gaps = 48/566 (8%)

Query: 12  LIDVKGLRVAFGGKEVVHG----IDFQIAAGEKLALVGESGSGKTVTALSLLRLVQNADV 67
           L++VK LR+ +  +  VH     +   I  GE + +VGESG+GK+    +++ L+     
Sbjct: 3   LLEVKNLRIEYPSRHGVHAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLLSPPGT 62

Query: 68  T--GEARLYGAERQQAPRDLLSIPERELRGIRGKEIAMIFQEPMTALNALYSVGDQIAEV 125
              GE  L G +       +  +  + +R +RG +I  IFQ+PMT+LN L++V  Q+ E 
Sbjct: 63  IAGGEVYLNGEK-------ISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTET 115

Query: 126 LELHEALSARAAQAAAVQLLADTGIPEPARRARAFPHQLSGGQRQRAMIAMALACKPRLL 185
           +  +  +SA  A   A+ L+   GIP+P  R + +PHQ SGG RQR +IA+ALA +P L+
Sbjct: 116 IHANMQVSAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLI 175

Query: 186 LADEPTTALDVTVRAQILDLLADLQHKYGMAVLLITHDLNLVRRFADRVVVMENGHVVEH 245
           +ADEPTTALDV+++ QIL+L+ +L  K  +  +L+THD+ +V    DRV VM  G +VE 
Sbjct: 176 IADEPTTALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEF 235

Query: 246 GAVAPVFDAPQHPYTRKLIDSHPTRDVAAVQASPAAVPVLEAKALRVI------------ 293
           G  A V   P+HPYTR LI + P  D   +   P    + EAK L+ +            
Sbjct: 236 GPTAKVLGTPEHPYTRSLISAVPRSD-RKLDRFPLVSYIEEAKELKPLDVKSHWLGQSQD 294

Query: 294 ---YPVPKPGIGG-----------WFRKGEFV-AVQGADFRIVPGETLGVVGESGSGKST 338
              Y  P   +             +  + E+V A     F +  GET G+VGESGSGKST
Sbjct: 295 HRKYTGPLLKVENVNLRFVTKDSLFESRREYVQASNNVSFAVHEGETFGLVGESGSGKST 354

Query: 339 LALAALGLLK-HQGALKIAGKDWAVDRASD--LGLRRVMQVVFQDPFSSLSPRMTVEQIV 395
           +A    GL + + G +   G D    ++      LRR MQ+VFQ+P++S++PRM +  I+
Sbjct: 355 IARVIAGLYQPNAGRVTFEGIDLTALKSEHERRPLRRQMQMVFQNPYTSMNPRMKIFDII 414

Query: 396 GEGLRVHAPELGVEARRARSLAALADVGLTESQFPSLLDRYPHEFSGGQRQRLAIARALI 455
            E +R H         R      L  VGL   +   L  +YPHEFSGGQRQR++IARAL 
Sbjct: 415 AEPIRFHKLTRSESETRQIVNDLLEHVGL--GKMAGL--KYPHEFSGGQRQRISIARALA 470

Query: 456 VDPQLLVLDEPTSALDVTIQKQVLGLLQRLQRERGLSYLLITHDVEVIRAMAHQVIVMKD 515
             P+LL+ DEPTSALDV++Q Q+L LL+ LQ E  L+ L I+HD+ VIR M  +V VM+ 
Sbjct: 471 TRPRLLICDEPTSALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVGVMQM 530

Query: 516 GAILETGPVERVLGAPEHPYTKKLVA 541
           G +LE  P E++   P+H Y+KKL++
Sbjct: 531 GTLLEVAPTEQLFTDPQHEYSKKLIS 556



 Score =  174 bits (441), Expect = 8e-48
 Identities = 105/268 (39%), Positives = 160/268 (59%), Gaps = 23/268 (8%)

Query: 284 VLEAKALRVIYPVPKPGIGGWFRKGEFVAVQGADFRIVPGETLGVVGESGSGKSTLALAA 343
           +LE K LR+ YP          R G   AV+     I  GE +GVVGESG+GKST+  A 
Sbjct: 3   LLEVKNLRIEYPS---------RHGVHAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAV 53

Query: 344 LGLLKHQGALKIAGKDWAV--DRASDLGLRRVMQV-------VFQDPFSSLSPRMTVEQI 394
           + LL   G   IAG +  +  ++ S L  + + +V       +FQDP +SL+P  TVE  
Sbjct: 54  IDLLSPPGT--IAGGEVYLNGEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQ 111

Query: 395 VGEGLRVHAPELGVEARRARSLAALADVGLTESQFPSLLDRYPHEFSGGQRQRLAIARAL 454
           + E +  +  ++  E    R+L+ +  VG+ + +  + L +YPH+FSGG RQR+ IA AL
Sbjct: 112 LTETIHANM-QVSAEEAYQRALSLMKQVGIPQPE--NRLKQYPHQFSGGMRQRVVIAIAL 168

Query: 455 IVDPQLLVLDEPTSALDVTIQKQVLGLLQRLQRERGLSYLLITHDVEVIRAMAHQVIVMK 514
             +P L++ DEPT+ALDV+IQ Q+L L++ L ++  +  +L+THD+ V+  +  +V VM 
Sbjct: 169 AGEPDLIIADEPTTALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMY 228

Query: 515 DGAILETGPVERVLGAPEHPYTKKLVAA 542
            G ++E GP  +VLG PEHPYT+ L++A
Sbjct: 229 RGDLVEFGPTAKVLGTPEHPYTRSLISA 256



 Score =  159 bits (402), Expect = 3e-43
 Identities = 106/281 (37%), Positives = 156/281 (55%), Gaps = 27/281 (9%)

Query: 2   SDNNNKTGQPLIDVKGLRVAFGGKEVV-----------HGIDFQIAAGEKLALVGESGSG 50
           S ++ K   PL+ V+ + + F  K+ +           + + F +  GE   LVGESGSG
Sbjct: 292 SQDHRKYTGPLLKVENVNLRFVTKDSLFESRREYVQASNNVSFAVHEGETFGLVGESGSG 351

Query: 51  KTVTALSLLRLVQ-NADVTGEARLYGAERQQAPRDLLSIP-ERELRGIRGKEIAMIFQEP 108
           K+  A  +  L Q NA   G     G        DL ++  E E R +R +++ M+FQ P
Sbjct: 352 KSTIARVIAGLYQPNA---GRVTFEGI-------DLTALKSEHERRPLR-RQMQMVFQNP 400

Query: 109 MTALNALYSVGDQIAEVLELHEALSARAAQAAAVQ-LLADTGIPEPARRARAFPHQLSGG 167
            T++N    + D IAE +  H+   + +     V  LL   G+ + A     +PH+ SGG
Sbjct: 401 YTSMNPRMKIFDIIAEPIRFHKLTRSESETRQIVNDLLEHVGLGKMA--GLKYPHEFSGG 458

Query: 168 QRQRAMIAMALACKPRLLLADEPTTALDVTVRAQILDLLADLQHKYGMAVLLITHDLNLV 227
           QRQR  IA ALA +PRLL+ DEPT+ALDV+V+AQIL+LL DLQ +  + +L I+HDL ++
Sbjct: 459 QRQRISIARALATRPRLLICDEPTSALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVI 518

Query: 228 RRFADRVVVMENGHVVEHGAVAPVFDAPQHPYTRKLIDSHP 268
           R+  DRV VM+ G ++E      +F  PQH Y++KLI   P
Sbjct: 519 RQMCDRVGVMQMGTLLEVAPTEQLFTDPQHEYSKKLISLMP 559