Pairwise Alignments

Query, 345 a.a., RNA 3'-terminal phosphate cyclase (EC 6.5.1.4) from Variovorax sp. SCN45

Subject, 339 a.a., RNA 3'-terminal phosphate cyclase from Methanococcus maripaludis S2

 Score =  147 bits (371), Expect = 4e-40
 Identities = 101/334 (30%), Positives = 166/334 (49%), Gaps = 18/334 (5%)

Query: 1   MIELDGSQGEGGGQILRTSLALSVATGQPLAIEKIRAGRAKPGLMRQHLACVNAAAAISG 60
           MI +DGS  EGGGQI+RT+++LS  T +P+ I  IR  R  PGL  QH+ACV A + I  
Sbjct: 3   MITIDGSYLEGGGQIVRTAVSLSAITKKPVKIINIRKNRKNPGLSNQHIACVAAVSKICN 62

Query: 61  AQVEGAELGSQALRFTPGAVRAGEYRFAISGAGSCMLVLQTVLPPLLLAGATSRVQLSGG 120
           A+VEG   GS+ L F PG + +  +   I  AGS  LV+Q++LP  L       + + GG
Sbjct: 63  AKVEGLIKGSETLVFYPGKIISKNFEIDIKTAGSISLVIQSILPISLAIDKNVEITIIGG 122

Query: 121 THNPMAPPFHFLERAFAPLVRRLGADLQLTLRRCGFYPAGGGEVAAVIVPAGGALQPFDL 180
           T+   +PP  +++      +  +G + ++T+ + GF+P GGG V   I P+   + P++L
Sbjct: 123 TNVEFSPPIDYIKNITLKFLENIGINSEITILKRGFFPKGGGIVKITIKPS--KINPYEL 180

Query: 181 TARGAYQES---HAECLAPGLPRHVPTRELDTLGVAMGWSGEQLRLGAVRQNEGPGNALM 237
                 +       + L   + + +     D L +  G+  E ++L  +   E  G  + 
Sbjct: 181 IENENIEIKGIVFNQNLDENISKRIRKSASDEL-LNRGFCPE-IKLEKI-NGESAGVGIF 237

Query: 238 ATLAYEHVTEVFTAFGEKSMSAEQVAHGLAKELRDFQKSEAAVGPHLADQLALLQALAAW 297
               Y     +    G+K + +E V    +++L +   ++ A+  HLADQ+      +  
Sbjct: 238 LYTNYIGSDRL----GKKGLLSEAVGTTASEKLLEELNTKMAIDSHLADQIIPFMPFS-- 291

Query: 298 QGRKACVFTCSELTEHTRTNCAVIERFLPVRFTI 331
                     S++T HT TN  V+E+F  V+F I
Sbjct: 292 ----DITIGVSKITNHTLTNIYVVEKFFDVKFNI 321