Pairwise Alignments

Query, 318 a.a., Ribonuclease Z (EC 3.1.26.11) from Variovorax sp. SCN45

Subject, 308 a.a., ribonuclease Z from Methanococcus maripaludis S2

 Score =  132 bits (332), Expect = 1e-35
 Identities = 90/314 (28%), Positives = 149/314 (47%), Gaps = 15/314 (4%)

Query: 2   MKLTFLGTSSGTPTRHRNVSGLAVQTVLGADWVLIDCGEGTQHRVLQTPLSLNDLAAVCI 61
           MK+TFLGT +  PT++R    ++++     +  L DCGE TQ +++ T +S   +  + I
Sbjct: 1   MKITFLGTGAAIPTKYRAHPSISLK--FDGEIFLFDCGENTQRQIIFTDVSPMKINNIFI 58

Query: 62  THVHGDHCYGLPGLLASAGMNKRTKPLKLIAPLPVWQWFEATRAL--TDLHLPYEVEHVN 119
           TH+HGDH  GLPGLL S     R KPL +  P    +  E    +    +  P  V  ++
Sbjct: 59  THLHGDHVLGLPGLLQSIAFQGRKKPLNIYGPAETVKMIEHILGVGYHSIDYPINVHEIS 118

Query: 120 LDGPSLVYEVPGVCIESHALLHRVPSHAYRVQVETRRVRLKADALRAIGLPPGPAWRALQ 179
              P  +       + S+ ++H VP+ AY V  + ++ R+  + ++ +G+  GP  + L+
Sbjct: 119 SKTPERIIFTNNYEVFSYPVVHSVPALAY-VFKQVKKPRMDLEKVKKLGIEIGPDLKRLK 177

Query: 180 TGEDVPFNGDVLRSADYTDAQVEAVAAVMGGDNAEPALLRDACK--SAQLLVHEATFTQD 237
            G +V  NG+++   D T    + +     GD        +  K      L+HEATF + 
Sbjct: 178 DGFNVELNGEIITLNDVTLPPKKGICVGYSGDTIPLKEFAEFLKELKCNTLIHEATFDK- 236

Query: 238 ALDKVGPGPMHSSARLLAEFAQAVEVPNLILTHFSARHQN----EEGMAALMAETQACYS 293
            +++     +HS+A      A+   V  ++LTH SAR+ N    E  +    AE      
Sbjct: 237 TMERNAKETLHSTATDALNIAKLSGVSTVLLTHISARYDNLNAFENEIVEFKAENPEI-- 294

Query: 294 GHAFLANDLDVYEL 307
            H  +A DL  Y L
Sbjct: 295 -HVLIAEDLMEYSL 307