Pairwise Alignments

Query, 540 a.a., Transcriptional regulatory protein RtcR from Variovorax sp. SCN45

Subject, 491 a.a., Helix-turn-helix, Fis-type from Pseudomonas syringae pv. syringae B728a

 Score =  145 bits (367), Expect = 3e-39
 Identities = 85/226 (37%), Positives = 129/226 (57%), Gaps = 9/226 (3%)

Query: 207 APILLVGPTGAGKSFLARRMFELKQSRHQMTGPFVEVNCATLRGDGAASTLFGHRKGSFT 266
           A +L++G +G GK  +AR +    + R     PFV VNC  +  +   S LFGH KG+FT
Sbjct: 168 ASVLILGESGTGKEVVARNLHYHSKRRD---APFVPVNCGAIPAELLESELFGHEKGAFT 224

Query: 267 GAAADRAGLLRTAHQGALFLDEIGELGLDEQAMLLKAIEEKRFFPVGADKEVESDFQLIA 326
           GA   RAG    A+ G LFLDEIG++ L  Q  LL+ ++E+ F  VG++K    D ++IA
Sbjct: 225 GAITSRAGRFELANGGTLFLDEIGDMPLPMQVKLLRVLQERTFERVGSNKTQSIDVRIIA 284

Query: 327 GTNRDLRSDVADGRFREDLFARINLWTYDLPGLAQRPEDIEPNVDHLLAIHAAENHRVVR 386
            T+++L + +  G FREDL+ R+N++  ++  L +R EDI   ++ L++    E    +R
Sbjct: 285 ATHKNLETMIELGSFREDLYYRLNVFPIEMAPLRERVEDIPLLMNELISRMEHEKRGSIR 344

Query: 387 FNAEARAAYLRFAQSGEAVWSGNFRDLSASVTRLATLADGGRIPVA 432
           FN+ A  +  R A      W GN R+L+  V R+A +   G I VA
Sbjct: 345 FNSAAIMSLCRHA------WPGNVRELANLVERMAIMHPYGVIGVA 384