Pairwise Alignments

Query, 540 a.a., Transcriptional regulatory protein RtcR from Variovorax sp. SCN45

Subject, 584 a.a., nif-specific transcriptional activator NifA from Rhodopseudomonas palustris CGA009

 Score =  153 bits (386), Expect = 2e-41
 Identities = 97/247 (39%), Positives = 136/247 (55%), Gaps = 10/247 (4%)

Query: 183 GIATRNARFNALIDEIERVAVRSRAPILLVGPTGAGKSFLARRMFELKQSRHQMTGPFVE 242
           GI   +     L+ ++  +A +S++P+LL G +G GK  +A+ + EL     +  GPF++
Sbjct: 228 GIVGESPAIRKLLAKVSIIA-KSQSPVLLRGESGTGKELIAKAIHELSA---RANGPFIK 283

Query: 243 VNCATLRGDGAASTLFGHRKGSFTGAAADRAGLLRTAHQGALFLDEIGELGLDEQAMLLK 302
           +NCA L      S LFGH KG+FTGA A R G    A +G LFLDEIGE+    QA LL+
Sbjct: 284 INCAALPESVLESELFGHEKGAFTGAIASRKGRFELADKGTLFLDEIGEISASFQAKLLR 343

Query: 303 AIEEKRFFPVGADKEVESDFQLIAGTNRDLRSDVADGRFREDLFARINLWTYDLPGLAQR 362
            ++E+ F  VG ++ ++ + +++A TNR+L   VA   FR DL+ RIN+    LP L  R
Sbjct: 344 VLQEQEFERVGGNQTIKVNVRIVAATNRNLEEAVARKEFRADLYYRINVVPMILPPLRDR 403

Query: 363 PEDIEPNVDHLLAIHAAENHRVVRFNAEARAAYLRFAQSGEAVWSGNFRDLSASVTRLAT 422
           P DI       L     EN R + F  E+ A  L  A S    + GN R+L   V R AT
Sbjct: 404 PSDIPLLASEFLKNFNKENGRELAF--ESHALDLLKACS----FPGNVRELENCVRRTAT 457

Query: 423 LADGGRI 429
           LA G  I
Sbjct: 458 LAMGPEI 464