Pairwise Alignments

Query, 219 a.a., Bacterial ribosome SSU maturation protein RimP from Variovorax sp. SCN45

Subject, 151 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 54.3 bits (129), Expect = 1e-12
 Identities = 39/120 (32%), Positives = 59/120 (49%), Gaps = 22/120 (18%)

Query: 3   LQQIVEQTVAGLGYDLVEIERSAGG---LLRVTIDLPWTAPTSEAVAAGLPEPFVTVEDC 59
           L  +++  V  LG+ L  IE    G   +LRV ID                E  + +EDC
Sbjct: 8   LADMLKVPVEALGFQLWGIEYVQAGKHSILRVFID---------------GENGINIEDC 52

Query: 60  EKVTRQLQFALEVD---GVDYKRLEVSSPGIDRPLRNEQDFERFVGEVIDITLKAPMGAA 116
             V+RQ+   L+V+     +Y  LEVSSPG+DRPL   + +  +VGE + + L  P+  +
Sbjct: 53  ANVSRQVSAVLDVEDPISTEYT-LEVSSPGVDRPLFTAEQYAAYVGEDVKLQLTMPVAGS 111