Pairwise Alignments

Query, 288 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 537 a.a., branched-chain amino acid ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  135 bits (341), Expect = 2e-36
 Identities = 98/288 (34%), Positives = 155/288 (53%), Gaps = 19/288 (6%)

Query: 8   GVLLGGLYTLFALGQSLMFGVMRLTNTAQGDFIILGA---FAVIAGVSLTGDAVAPWLVA 64
           G+ LG +  L A+G ++ FGVM + N A G+ ++LGA   F V   V  +   +  W +A
Sbjct: 248 GLSLGSVLLLAAIGLAITFGVMGIINMAHGEMVMLGAYTTFLVQDVVRTSFPHLFEWSLA 307

Query: 65  LAVLPVAF----GFGYALQRYVLNGTLGKDPLPSLVVTFGLSIVIQNLLLELFSADPRAI 120
           +A LP+AF      G AL+R V+    G+ PL +L+ T+G+S+++Q  +  +F    R +
Sbjct: 308 IA-LPLAFLVTGAVGLALERGVIRFLYGR-PLETLLATWGISLILQQTVRTIFGPTNREV 365

Query: 121 ETGGLSTQGVALGS-AMSVGVLPLVVLAIALLATGALQWLFARTALGRSFRAVSDDREIA 179
                 +    LG  A++   L ++V A+A+ A  AL +L  +T +G   RAV+ +R +A
Sbjct: 366 GNPSWMSGAFELGGLAITWNRLWIIVFALAVFA--ALLFLLKKTPMGLQMRAVTQNRRMA 423

Query: 180 ELMGLNAKKVYAFATAIAFVLIAIAGALQGMRTTVSPSDGPLLLLFAFEAVIIGGMGSFW 239
             MG+    V A   A+   +  IAG        VSP+ G   ++ +F  V+ GG+G+ W
Sbjct: 424 SSMGIRTPWVDALTFALGSGIAGIAGVALSQIDNVSPNLGQGYIIDSFMVVVFGGVGNLW 483

Query: 240 GTLAGAMILGITQQIGFRLDPGWGIWFGHIVFLVVLVL----RPQGLF 283
           GTL GA  LGI  +    L+P  G   G I+ LV+++L    RP+GLF
Sbjct: 484 GTLVGAFSLGILNKF---LEPYAGAVLGKILVLVLIILFIQKRPRGLF 528