Pairwise Alignments

Query, 417 a.a., ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 372 a.a., ABC-type branched-chain amino acid transport systems, periplasmic component from Pseudomonas stutzeri RCH2

 Score = 57.4 bits (137), Expect = 7e-13
 Identities = 90/397 (22%), Positives = 164/397 (41%), Gaps = 52/397 (13%)

Query: 5   RRQFTQATAALVASGAAPLVFAADTLKIGYVSPQTGPLAPFGEAD----KWVIDQM-KAA 59
           +++ ++   A+  +GAA    AADT++IG   P TGP+A +G+      +  I+Q+ KA 
Sbjct: 4   KQRLSKIFLAMALTGAASYTLAADTIRIGLAGPVTGPVAQYGDMQFIGAEMAIEQINKAG 63

Query: 60  FKDGIAVGGRKYAVQIVLKDSQSNPNRAGEVANDLILKDKVALVLTAGTPETANPVSDAC 119
             +G  + G +Y       D   +P +A  VAN  I+ D V  V+      +  P SD  
Sbjct: 64  GVNGAQLKGVRY-------DDACDPKQAVAVANK-IVNDNVKFVVGHLCSSSTQPASDIY 115

Query: 120 ELNEVPCVSSVVPWQPWFFGRKGDPAKGFNWTYHMFWGLEDVIANFTNGWKTLATNKKVG 179
           E   +  +++               ++G+   +    GL+ +       +       K  
Sbjct: 116 EDEGILMITAAST-------SPDITSRGYELIFRTI-GLDSLQGPTAGNFIADHVKPKNV 167

Query: 180 GLFPND---GDGNAWGDKELGFPKPLAQMGFTLTDPGRFQN---GTQDFSAQIAAFKSAG 233
            +  +    G+G A   K+    K +          G F+    G +DFS+ IA  K  G
Sbjct: 168 AVIHDKQQYGEGIATAVKQTLEGKNI--------KVGLFEGINAGDKDFSSLIAKLKREG 219

Query: 234 CEIVTGVVIPPDAKTFLTQARQQGFRPKVITLGKALLFPGAIEAL-GDLGDGLSTEVWWS 292
            + V      P+    L Q++++G    V  +G   +    I A+ G   +G+   +   
Sbjct: 220 VDFVYYGGYHPELGLLLRQSKEKGL--NVRFMGPEGVGNSEISAIAGPASEGMYVTL--- 274

Query: 293 PSHPFTSSLTQQSA-KALADAYEAGTKKQWTQPIGF-AHALFEVAANALGRAKSLKASDV 350
                  S  Q    K L D ++A  K+  + P  F A+A  +V A  + +A S     V
Sbjct: 275 -----PKSFDQDPRNKELVDGFKA-KKQDPSGPFVFPAYAAVQVIAEGIEKAGSTDTDKV 328

Query: 351 RDAVASTSINSVVGPVKWGGQGPFKNVSKTPLVLGQW 387
            +A+ S + ++  G + +  +G  K+ +    V+ +W
Sbjct: 329 AEALRSNTFDTPTGMLSFDEKGDLKDFN---FVVYEW 362