Pairwise Alignments

Query, 993 a.a., Translation initiation factor 2 from Variovorax sp. SCN45

Subject, 898 a.a., translation initiation factor IF-2 from Vibrio cholerae E7946 ATCC 55056

 Score =  810 bits (2092), Expect = 0.0
 Identities = 484/1002 (48%), Positives = 623/1002 (62%), Gaps = 114/1002 (11%)

Query: 1   MSSTTVAEFANELKKTPETLLDQLKSAGVPKAAATDALTEADKQRLLGHLKASHGTVE-P 59
           M+  TV   + E+    + LL+QL  AG+ KA A D ++E +KQ+LL HL+  HG     
Sbjct: 1   MTQITVKALSEEIGTPVDRLLEQLADAGMNKAVA-DHVSEDEKQKLLAHLRKEHGDATGS 59

Query: 60  ERKKITLTKKSTSEIKQADATGRARTIQVEVRKKRTFIQREDGHPASPEAAPQVAEAPAA 119
           E  ++TL +K+ S +      G+++ +QVEVRKKRT+++R                    
Sbjct: 60  EPTRLTLQRKTRSTLSVNAGGGKSKNVQVEVRKKRTYVKRSSV----------------- 102

Query: 120 APAAPRVDEAELARREEEARRQAELIRRQEEELAEKRRLREEAEAREREQAEKAERAEQA 179
                          E+EA R+AE                 EA  R  E     E+A++ 
Sbjct: 103 ---------------EDEATREAE-----------------EAAMRAAE-----EQAKRE 125

Query: 180 EQEAARVAAEKKAAAEAAAAAAAAKNTPAKPAAPAPAPAVTAAAAAAEQQAADTKLAAQN 239
            +EAA+ AAE+KA  EA  AA   +   AK  A   A   T AA    Q  +D +   Q 
Sbjct: 126 AEEAAQRAAEEKAKREAEEAAK--REAEAKRMAEEKAKRETQAAT---QPRSDEEKLKQE 180

Query: 240 AATQAKEDAKAKAAAESKARADEEAAR----AKDLDERR-RKALAEAEAIRAMM-NAPAR 293
           AA +  E  K +   E++ +A+EE+ R     ++L E+   +  A+ E +  M  N    
Sbjct: 181 AARKEAEALKRRQEEEARRKAEEESRRQLEKVRELAEKNGERWSADKETVGDMQENTDYH 240

Query: 294 VLVPHKAPEKPQPEKAAVKGTLHKPATPAARPGAPAAPGAAAAPGAAAGAGKEVKSAKLS 353
           V     A E      A  +  LH+                          G   +S K  
Sbjct: 241 VTTSRYARE------AEDEADLHEE-------------------------GARRRSTK-- 267

Query: 354 SSWAGDPAKKKEIKTRGDASGGVGRGNWRGGPRGRRGNDRGGHDEQHAPAAPVEARILEV 413
                  A K+++ +R D      R   RGG  GR+G        QH           +V
Sbjct: 268 -------ANKRKMSSRDDNQERDSRP--RGGKAGRKGRINKPMSMQHGFDKTAVVAKADV 318

Query: 414 HVPETITVAELAHKMAVKAQEVIKQLMKLGQMATINQSLDQDTAMILVEEMGHNAVVAAL 473
            V ETI V+ELA KM+VKA EVIK +MK+G MATINQ +DQ+TA ++ EEMGH  V+   
Sbjct: 319 VVGETIVVSELAQKMSVKATEVIKVMMKMGAMATINQVIDQETAQLVAEEMGHKVVLRKE 378

Query: 474 DDPEA--FTDEDVSAQTAEALPRAPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQH 531
           ++ E    +D D      E + RAPVVT+MGHVDHGKTS LDYIRR  VA+GEAGGITQH
Sbjct: 379 NELEEAILSDRD---DKFEEVSRAPVVTIMGHVDHGKTSTLDYIRRTHVASGEAGGITQH 435

Query: 532 IGAYHVETERGMVSFLDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTKEAIKHAK 591
           IGAYHVET  GM++FLDTPGH AFTAMRARGAQATDIV+LVVAADDGVMPQT EAI+HAK
Sbjct: 436 IGAYHVETPNGMITFLDTPGHAAFTAMRARGAQATDIVVLVVAADDGVMPQTVEAIQHAK 495

Query: 592 AAGVPIVVAINKVDKPDANLDRVKQELVAEEVVPEEYGGDVPFVPVSAKTGQGIDDLLEQ 651
           AAGVP++VA+NK+DK  AN D VK EL    V+PEE+GGD  FV +SAK G  ID LLE 
Sbjct: 496 AAGVPLIVAVNKIDKDTANPDNVKTELSQYNVMPEEWGGDNMFVHISAKQGTNIDGLLEA 555

Query: 652 VLLQAEVLELKAPVDAAAKGLVIEAQLDKGRGPVATVLVQSGTLKTGDVVLAGSTYGRVR 711
           +LLQAEVLELKA     A G+VIE++LDKGRGPVATVLVQSGTL+ GD+VL G  YGRVR
Sbjct: 556 ILLQAEVLELKAVKQGMASGVVIESRLDKGRGPVATVLVQSGTLRKGDIVLCGQEYGRVR 615

Query: 712 AMLDEDGKATKAAGPSIPVEIQGLTEVPQAGDEFMVMSDERRAREIATYRAGKFRNTKLA 771
           AM DE G   + AGPSIPVEI GL+ VP AGDE  V+ DER+ARE+A YRAGKFR  KLA
Sbjct: 616 AMRDEVGNEVEEAGPSIPVEILGLSGVPAAGDEATVVRDERKAREVANYRAGKFREVKLA 675

Query: 772 KAQAANLQNMFTDLSAGEVQTLRIIIKADVQGSQEALAQSLLKLATDEVKVQVVYAGVGG 831
           + Q + L+NMF++++AG+V  L I++KADVQGS EA+A SL KL+TDEVKV +V +GVGG
Sbjct: 676 RQQKSKLENMFSNMTAGDVAELNIVLKADVQGSVEAIADSLTKLSTDEVKVNIVGSGVGG 735

Query: 832 ISESDINLAIASKAVVIGFNVRADAGARKLAEGNGVQLNYYSIIYDAVDEIKVAMSGMLA 891
           I+E+D  LA AS A+V+GFNVRADA AR++ E   + L YYSIIY  +DE+K AMSGML+
Sbjct: 736 ITETDAVLAAASNAIVVGFNVRADASARRMIEAENIDLRYYSIIYQLIDEVKQAMSGMLS 795

Query: 892 PERREEIIGSAEIRTVFVASKIGTVAGSYITSGSVNRSAHFRLLRDNVVVYTGEVDSIKR 951
           PE ++EIIG AE+R VF + K+G +AG  +T G + R+A  R+LRDNVV+Y GE++S++R
Sbjct: 796 PEFKQEIIGLAEVRDVFKSPKLGAIAGCMVTEGVIKRNAPIRVLRDNVVIYEGELESLRR 855

Query: 952 MKDDVREVREGFECGIKLKNYNDIKEGDQLEFFEIKEIARTL 993
            KDDV EV+ G+ECGI +KNYND++ GDQ+E FE  EI RT+
Sbjct: 856 FKDDVAEVKNGYECGIGVKNYNDVRVGDQIEVFETIEIQRTI 897