Pairwise Alignments

Query, 437 a.a., Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily from Variovorax sp. SCN45

Subject, 562 a.a., type IV-A pilus assembly ATPase PilB from Vibrio cholerae E7946 ATCC 55056

 Score = 71.2 bits (173), Expect = 8e-17
 Identities = 78/307 (25%), Positives = 131/307 (42%), Gaps = 30/307 (9%)

Query: 42  FGRWSRASIQQFVELEVDSFVRLRRVPINDREMQLISDALTKELAGFGPLEDLLNDPA-- 99
           +GR  + +  Q  E+  D    L  V ++D E+Q I D    +      +  +L D    
Sbjct: 139 YGRSIQGAANQGKEISQDELANL--VKVSDDELQSIEDLSQDDSPVSRFINQVLLDAVRK 196

Query: 100 -VEDILINGYQNVYVSRHGMLERETVRFADSEHVMRIVRRILAPLGRRLDESNPMVDARL 158
              DI    Y+N Y  R   L  + +     +    + RR+ A +  ++     + + RL
Sbjct: 197 GASDIHFEPYENQYRIR---LRCDGILVETQQPASHLSRRLAARI--KILSKLDIAERRL 251

Query: 159 PDGGRINVIIEPLAIDGLSVS----------IRKFRKEPLTPMDLVKLGTFDAGMAQLLE 208
           P  GRI + +       + VS          + +        +D+ KLG         L 
Sbjct: 252 PQDGRIKLRLSRDTAIDMRVSTLPTLWGEKIVLRLLDSSAANLDIDKLGYNPQQKQLYLN 311

Query: 209 IAVRARCNILVSGGTSSGKT-SLLNALASYIPARERVITIEDTAELSLGTSHVVRLESRP 267
              R +  IL++G T SGKT SL   L     ++  + T ED  E++L   + V+++ + 
Sbjct: 312 ALKRPQGMILMTGPTGSGKTVSLYTGLRILNTSQINISTAEDPVEINLSGINQVQVQPKI 371

Query: 268 GGFDGTGVVSIRDLLRNSLRMRPDRIIVGEVRGAEVIEM-MQAMNTGHEGSMGTIHASSP 326
           G           + LR+ LR  PD ++VGE+R  E  E+ ++A  TGH   + T+H +S 
Sbjct: 372 G-------FGFAEALRSFLRQDPDVVMVGEIRDLETAEIAVKAAQTGHL-VLSTLHTNSA 423

Query: 327 RECLYRL 333
            E + RL
Sbjct: 424 AETVIRL 430