Pairwise Alignments

Query, 437 a.a., Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily from Variovorax sp. SCN45

Subject, 546 a.a., type II/IV secretion system ATPase subunit from Methanococcus maripaludis S2

 Score =  144 bits (364), Expect = 5e-39
 Identities = 100/340 (29%), Positives = 178/340 (52%), Gaps = 20/340 (5%)

Query: 66  RVPINDREMQLISDALTKELAGFGPLEDLLNDPAVEDILINGYQNVYVSR--HGMLERET 123
           ++ IN  E       L ++L G G LE +  DP +EDI + G +N  +    + ML    
Sbjct: 143 KININKSERDKFLYLLKRDLIGLGTLEPIKRDPYIEDIHVIGAKNCQLVHKIYDMLP-SN 201

Query: 124 VRFADSEHVMRIVRRILAPLGRRLDESNPMVDARLPDGGRINVIIE-PLAIDGLSVSIRK 182
           + + D   +   ++ +   +GR + ++ P+VD  LPDG RIN++    +++ G S +IRK
Sbjct: 202 IEWEDEGDISNYLKNMCERIGRPVSDATPIVDGSLPDGSRINILYSGDVSLKGPSFTIRK 261

Query: 183 FRKEPLTPMDLVKLGTFDAGMAQLLEIAVRARCNILVSGGTSSGKTSLLNALASYIPARE 242
           F   P++   ++  GT  A  A  L + +    +I + G T+SGKT+ LNA+  +I  + 
Sbjct: 262 FTDVPISITQIISWGTMSAQTAAYLWLCLEYGMSIFICGETASGKTTSLNAILPFIKPKS 321

Query: 243 RVITIEDTAELSLGTSHVVRLESRPGGFDGTGVVSIRDLLRNSLRMRPDRIIVGEVRGAE 302
           ++ + EDT+E+        +L +R  G + +  V++ DLLR +LR RP+ IIVGE+R  E
Sbjct: 322 KIFSCEDTSEVKPPNPVWQQLLTRERGPEESR-VTLFDLLRAALRSRPNYIIVGEIRSVE 380

Query: 303 VIEMMQAMNTGHEGSMGTIHASSPRECLYRLEMLAGFAGYQGSEVSLRRQIANAIDF-IV 361
                QAM TGH   + T HA++ R+ + RL          G  + + +   + ++  + 
Sbjct: 381 GAVAFQAMQTGHP-VISTFHAANVRKMIQRL---------TGDPICIPQTFMDNLNVCLF 430

Query: 362 QIGRLSGGQ--RRIISLSEVTGVNDNV--VAMQELYRYEP 397
           Q+   + G+  RR++S+ E+ G    V  V  + ++ ++P
Sbjct: 431 QLAVYARGKFLRRVVSVEEIEGYYKEVDGVITRGVFEWDP 470