Pairwise Alignments

Query, 879 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 241 a.a., signal peptide protein from Sinorhizobium meliloti 1021

 Score = 51.2 bits (121), Expect = 7e-11
 Identities = 34/108 (31%), Positives = 49/108 (45%)

Query: 553 ILQANRDFTGMDLTGADLSDMDLQGACFRRALLEGADLRRARCEGADFSEAVLVRAQLSS 612
           I+    D  G +L   D +  DL+GA    A LE A L RA   GA   +A   R +   
Sbjct: 54  IMLGGSDLPGSNLFNTDFTMTDLRGANLTSANLEKATLVRASLAGARADKANFSRVEAYR 113

Query: 613 GDFTRAIFRDTNLAGIHCEQAGFSHALFEGATFEKLKFVRCDFSSARL 660
           G+F+     + + A    ++  F+ A   GA FEK +  R +F  A L
Sbjct: 114 GNFSAISAENASFASAELQRTDFTGARLTGADFEKAELGRANFDKAVL 161



 Score = 50.8 bits (120), Expect = 9e-11
 Identities = 35/118 (29%), Positives = 58/118 (49%)

Query: 751 SSLRNADFEEATLVQCSLREIPMEGARFVRATLDTCDLSSCNLTAADLGAAQTPESLFIR 810
           ++L +A+ E+ATLV+ SL     + A F R      + S+ +   A   +A+   + F  
Sbjct: 79  ANLTSANLEKATLVRASLAGARADKANFSRVEAYRGNFSAISAENASFASAELQRTDFTG 138

Query: 811 SNLSRASLRAANLMNANFNKARLLSADLREANLFRADMSQIVIDDVTETRDAYIVHTK 868
           + L+ A    A L  ANF+KA L       ANL RA +S  V++   +   A++  T+
Sbjct: 139 ARLTGADFEKAELGRANFDKAVLTGTRFSMANLSRAKLSGAVLEGPIDLDRAFLFLTR 196



 Score = 45.8 bits (107), Expect = 3e-09
 Identities = 55/208 (26%), Positives = 78/208 (37%), Gaps = 51/208 (24%)

Query: 608 AQLSSGDFTRAIFRDTNLAGIHCEQAGFSHALFEGATFEKLKFVRCDFSSARLHHLHVIE 667
           + L + DFT    R  NL   + E+A    A   GA  +K  F R +             
Sbjct: 64  SNLFNTDFTMTDLRGANLTSANLEKATLVRASLAGARADKANFSRVE------------- 110

Query: 668 SQLLHCRFDAIDAAYIGFLSDVAIEDCSFRGARLVKAGFLGCRVAGLDFTGAELEACAWT 727
                        AY G  S ++ E+ SF  A L +  F G R+ G DF  AEL      
Sbjct: 111 -------------AYRGNFSAISAENASFASAELQRTDFTGARLTGADFEKAEL------ 151

Query: 728 HMNCDEHMSFARALLRTTCFAGNSSLRNADFEEATLVQCSLREIPMEGARFVRATLDTCD 787
                   +F +A+L  T F+  ++L  A    A L       I ++ A      ++  D
Sbjct: 152 -----GRANFDKAVLTGTRFS-MANLSRAKLSGAVLE----GPIDLDRAFLFLTRIEGVD 201

Query: 788 LSSC--------NLTAADLGAAQTPESL 807
           LSS         +LT  D GA + P  L
Sbjct: 202 LSSASGLTQEQVDLTCGD-GATKLPSGL 228



 Score = 44.3 bits (103), Expect = 8e-09
 Identities = 41/156 (26%), Positives = 60/156 (38%), Gaps = 7/156 (4%)

Query: 565 LTGADLSDMDLQGACFRRALLEGADLRRARCEGADFSEAVLVRAQLSSGDFTRAIFRDTN 624
           L G+DL   +L    F    L GA+L  A  E A    A L  A+    +F+R      N
Sbjct: 56  LGGSDLPGSNLFNTDFTMTDLRGANLTSANLEKATLVRASLAGARADKANFSRVEAYRGN 115

Query: 625 LAGIHCEQAGFSHALFEGATFEKLKFVRCDFSSARLHHLHVIESQLLHCRFDAIDAAYIG 684
            + I  E A F+ A  +   F   +    DF  A L   +  ++ L   RF   +     
Sbjct: 116 FSAISAENASFASAELQRTDFTGARLTGADFEKAELGRANFDKAVLTGTRFSMAN----- 170

Query: 685 FLSDVAIEDCSFRGARLVKAGFLG-CRVAGLDFTGA 719
            LS   +      G   +   FL   R+ G+D + A
Sbjct: 171 -LSRAKLSGAVLEGPIDLDRAFLFLTRIEGVDLSSA 205



 Score = 42.4 bits (98), Expect = 3e-08
 Identities = 36/133 (27%), Positives = 54/133 (40%), Gaps = 5/133 (3%)

Query: 544 AALRVKVLSILQANRDFTGMDLTGADLSDMDLQGACFRRALLEGADLRRARCEGADFSEA 603
           AA+     S  +A  D+   +     L   DL G+          DLR A    A+  +A
Sbjct: 30  AAVAADCKSSARAGIDWQDCNKKQIMLGGSDLPGSNLFNTDFTMTDLRGANLTSANLEKA 89

Query: 604 VLVRAQLSSGDFTRAIFRDTNLAGIHCEQAGFSHALFEGATFEKLKFVRCDFSSARLHHL 663
            LVRA L+     +A     N + +   +  FS    E A+F   +  R DF+ ARL   
Sbjct: 90  TLVRASLAGARADKA-----NFSRVEAYRGNFSAISAENASFASAELQRTDFTGARLTGA 144

Query: 664 HVIESQLLHCRFD 676
              +++L    FD
Sbjct: 145 DFEKAELGRANFD 157



 Score = 40.8 bits (94), Expect = 9e-08
 Identities = 22/65 (33%), Positives = 32/65 (49%)

Query: 787 DLSSCNLTAADLGAAQTPESLFIRSNLSRASLRAANLMNANFNKARLLSADLREANLFRA 846
           D   CN     LG +  P S    ++ +   LR ANL +AN  KA L+ A L  A   +A
Sbjct: 45  DWQDCNKKQIMLGGSDLPGSNLFNTDFTMTDLRGANLTSANLEKATLVRASLAGARADKA 104

Query: 847 DMSQI 851
           + S++
Sbjct: 105 NFSRV 109



 Score = 39.3 bits (90), Expect = 3e-07
 Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 5/102 (4%)

Query: 541 ERQAALRVKVLSILQANRDFTGMDLTGADLSDMDLQGACFRRALLEGADLRRARCEGADF 600
           E+   +R  +        +F+ ++    + S +  + A F  A L+  D   AR  GADF
Sbjct: 87  EKATLVRASLAGARADKANFSRVEAYRGNFSAISAENASFASAELQRTDFTGARLTGADF 146

Query: 601 SEAVLVRAQLSSGDFTRAIFRDTNLAGIHCEQAGFSHALFEG 642
            +A L RA     +F +A+   T  +  +  +A  S A+ EG
Sbjct: 147 EKAELGRA-----NFDKAVLTGTRFSMANLSRAKLSGAVLEG 183



 Score = 36.2 bits (82), Expect = 2e-06
 Identities = 31/124 (25%), Positives = 49/124 (39%), Gaps = 20/124 (16%)

Query: 750 NSSLRNADFEEATLVQCSLREIPMEGARFVRATLDTCDLSSCNLTAADLGAAQTPESLFI 809
           +S+    D+++    Q  L    + G+          DL   NLT+A+L  A    +   
Sbjct: 38  SSARAGIDWQDCNKKQIMLGGSDLPGSNLFNTDFTMTDLRGANLTSANLEKATLVRASLA 97

Query: 810 -----RSNLSR---------------ASLRAANLMNANFNKARLLSADLREANLFRADMS 849
                ++N SR               AS  +A L   +F  ARL  AD  +A L RA+  
Sbjct: 98  GARADKANFSRVEAYRGNFSAISAENASFASAELQRTDFTGARLTGADFEKAELGRANFD 157

Query: 850 QIVI 853
           + V+
Sbjct: 158 KAVL 161