Pairwise Alignments

Query, 438 a.a., Type I secretion membrane fusion protein, HlyD family @ Type I secretion system, membrane fusion protein LapC from Variovorax sp. SCN45

Subject, 439 a.a., HlyD family protein secretion protein from Sinorhizobium meliloti 1021

 Score =  156 bits (394), Expect = 1e-42
 Identities = 139/442 (31%), Positives = 212/442 (47%), Gaps = 33/442 (7%)

Query: 19  QTSPQGRRR--QWIIGGAVAVLALV-GLG-----FPMETVVVAPGRVIPSDRVKSIQHLE 70
           Q  P  RR   + +IG +V  LALV G+G       + + +VA G VI  D VK +QHL 
Sbjct: 7   QHKPTARRSLSRHLIGVSVLALALVAGVGGWAATTELSSAIVAGGVVIVDDNVKKVQHLT 66

Query: 71  GGIVSSVLVKEGDKVKTGQPLVEIDLGGSGLNLEELTARYAATQATRVRLMAESRGQPLR 130
           GGIV  +LVKEGD+V+ GQ L+ +D      NL  + +  A   A R RL AE  G    
Sbjct: 67  GGIVGELLVKEGDRVEAGQVLIRLDGTTVRANLAIIESTLAQFYARRARLQAERMG---- 122

Query: 131 RESFAKDIDEGVFEGETGAYQARALEQR--GVMAGAVSGLE-QARSKKLEQQAKVKGL-- 185
             SF  + D   F   T A +    EQR       A+SG++ Q  S+K +   +V+GL  
Sbjct: 123 AASFEIEEDLAEFIPGTAAAKLIEGEQRLFASRRSALSGMKGQLDSRKAQLADEVEGLTV 182

Query: 186 -----GDRLELMQKELEISEQLLSEKLVGQVEVLEKRRQAESVRSELAVARQGVVSADAA 240
                 + L+L+ +EL   + L  + LV    V   +RQ    R+EL   R   ++A A 
Sbjct: 183 QLNAIEEALKLIAEELTGVDSLFGQGLVPMQRVTTLKRQ----RAELEGGRGRHIAARAQ 238

Query: 241 I----TEAQAKMAEAEGRYRRRASDELATVERQFASLSEDLARARTQRSRTVVKAPSDGI 296
                +E   ++ + +   R   S EL  VE + A   E    A  Q  R  + AP  G 
Sbjct: 239 ARGKSSEIDLQILQLDEDRRSEISKELTDVEAKIAEYEERRTAATDQLRRLDITAPLSGR 298

Query: 297 VKGLRNSSPGWVVKPGESILEVVPDEDEIMVEARLNPNDRGFIEVGQTARVKITAYDYLR 356
           +  L   +   V+ PGE+++ VVP+ +++ VEA++  +D   I VGQ+  ++ +A++   
Sbjct: 299 IYQLAIHTVNGVINPGETLMLVVPEAEDLTVEAKVATHDIDQIRVGQSVEIRFSAFNQRT 358

Query: 357 YGAVDGKVKLVAADADRDPAISNGAPYYRLLISMSQSHVGRDEN-RITAGMESEVDLRVG 415
              V+ +V  VA D   D     GA YY L I      + + +   +  GM +EV +++ 
Sbjct: 359 TPEVEAEVVTVAPDLVTDE--RTGASYYPLRIRPKAESLAKLKGLSLYPGMPAEVFIKIA 416

Query: 416 TDPFIWYILRPVLKLRREAFRE 437
               I Y+ +P+    R AFRE
Sbjct: 417 DRTVISYLTKPLTDQMRHAFRE 438