Pairwise Alignments

Query, 612 a.a., GTP-binding protein TypA/BipA from Variovorax sp. SCN45

Subject, 609 a.a., translational GTPase TypA from Vibrio cholerae E7946 ATCC 55056

 Score =  711 bits (1834), Expect = 0.0
 Identities = 362/612 (59%), Positives = 458/612 (74%), Gaps = 9/612 (1%)

Query: 1   MSTKQI---RNIAIIAHVDHGKTTMVDQLLRQSGTFADHEKVVDTVMDNNAIEKERGITI 57
           M+T QI   RNIAIIAHVDHGKTT+VD+LL+QSGT      V + VMD+N IEKERGITI
Sbjct: 1   MTTPQIEKLRNIAIIAHVDHGKTTLVDKLLQQSGTLESRGDVEERVMDSNDIEKERGITI 60

Query: 58  LAKNCAVTWQGTHINIVDTPGHADFGGEVERALSMVDGVVLLIDAQEGPMPQTRFVTKKA 117
           LAKN A+ W    INIVDTPGHADFGGEVER +SMVD V+L++DA +GPMPQTRFVT+KA
Sbjct: 61  LAKNTAINWNDYRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKA 120

Query: 118 LALGLKPILVVNKVDKPGANPDKVVNAAFDLFDKLGATDEQLDFPVVYASGINGWSSLEE 177
            A GLKPI+V+NK+D+PGA PD V++  FDLFD LGATDEQLDF VVYAS +NGW++L E
Sbjct: 121 FAHGLKPIVVINKIDRPGARPDWVMDQVFDLFDNLGATDEQLDFQVVYASALNGWATLVE 180

Query: 178 GAPGEQWGPDMSALFDTILKHVPSQKGDPAAPLQLQISALDFSTFVGRIGVGRISQGTLK 237
           G  GE    +M  LF  I+ +V + + D   PLQ+QIS LD+S++VG IGVGRI +G +K
Sbjct: 181 GETGE----NMEPLFQAIVDNVAAPQVDLDGPLQMQISQLDYSSYVGVIGVGRIKRGKVK 236

Query: 238 PMTDVVVMEGPDGKSIKGRVNQVLTFQGLDRVQATEAGPGEIVLINGIADIGIGVTITDP 297
           P   V V+ G DGK   G++  VL + GL R +  +A  G+IV + G+ ++ I  TI D 
Sbjct: 237 PNQQVTVI-GADGKKRNGKIGTVLGYLGLQRSETDQATAGDIVAVTGLGELKISDTICDV 295

Query: 298 ANPAPLPMLKVDEPTLTMNFCVNTSPLAGREGKFVTSRQIWDRLQKELQHNVALRVNETD 357
                LP L VDEPT+TM F VNTSP AG+EGKFVTSR I +RL+KEL HNVALRV +T+
Sbjct: 296 NALEALPPLSVDEPTVTMTFQVNTSPFAGKEGKFVTSRNILERLEKELVHNVALRVEQTE 355

Query: 358 EEGIFEVMGRGELHLTILLENMRREGYEMAVSKPRVVFRTVNGEKHEPIELVTADIEDQH 417
           +   F V GRGELHL+IL+ENMRREG+E+AVS+P V+ +  +G+  EP E VT D++++H
Sbjct: 356 DPDKFRVSGRGELHLSILIENMRREGFELAVSRPEVILKHEDGQLMEPFETVTIDVQEEH 415

Query: 418 QGGVMQALGERKGELVNMEPDGRGRVRLEYRIPARGLIGFTNEFLNLTRGSGLISNIFDS 477
           QGG+M+ +G RKGEL +M PDG+GR+R+++ +P+RGLIGF  EF+ LT GSGL+ + FD 
Sbjct: 416 QGGIMEKIGMRKGELKDMSPDGKGRIRMDFVMPSRGLIGFQTEFMTLTSGSGLLYHSFDH 475

Query: 478 YEPHKGD-IGGRKNGVLISMDDGEIFTYALGKLDDRGRMFVRANDPVYEGMIVGIHSRDN 536
           Y PHKG  IG R NGVL+S   G+  T AL  L +RGRMF+     VYEGM++GIHSRDN
Sbjct: 476 YGPHKGGVIGQRVNGVLVSNGTGKALTNALFNLQERGRMFIGHGVEVYEGMVIGIHSRDN 535

Query: 537 DLVVNATRTKQLTNFRVSGKEDAIKITPPIELTLEYGVEFIEDDELVEITPKSVRLRKRF 596
           DL VN  + KQLTN R SG +DA  +TPPI ++LE  +EFI+DDELVE+TP S+R+RKRF
Sbjct: 536 DLTVNPLKGKQLTNVRASGTDDAQVLTPPIIMSLEQALEFIDDDELVEVTPVSIRIRKRF 595

Query: 597 LKEHERKRAGRD 608
           L E++RKRA RD
Sbjct: 596 LTENDRKRASRD 607