Pairwise Alignments

Query, 230 a.a., Putative periplasmic cytochrome type-C oxidoreductase signal peptide protein (EC 1.-.-.-) from Variovorax sp. SCN45

Subject, 107 a.a., cytochrome C biogenesis protein CcsB from Vibrio cholerae E7946 ATCC 55056

 Score = 57.8 bits (138), Expect = 8e-14
 Identities = 40/111 (36%), Positives = 59/111 (53%), Gaps = 12/111 (10%)

Query: 1   MNKLLTTMFALAVACVTVSAEAQQVTGKAQDGAKKVAMCVGCHGIIGYQASFPEIHKVPM 60
           MNK++    ALA+    +S  A  + G    G  K A+C  CHG+ G       I   P 
Sbjct: 5   MNKMV---IALALGGCAMSGAA--LAGDVAAGQAKAAVCAACHGMDGIAV----IPGYPN 55

Query: 61  IAGQSATYITAALTAYKGGDRKH---PTMRAIADTLTEQDIADLAAYYSQL 108
           + GQS  Y+ +++ AYK  +R       M+A A  L+++DIA+LAAYY+ L
Sbjct: 56  LKGQSEQYLISSVKAYKNKERTGGLAAVMQAQAMMLSDEDIANLAAYYASL 106



 Score = 35.4 bits (80), Expect = 4e-07
 Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 5/74 (6%)

Query: 140 CTKCHGANFNTPNDGTVPKLAGQHADYLFVALKSYRVKNNPHLGRSNAVMGQQVEEKKFT 199
           C  CHG +      G  P L GQ   YL  ++K+Y  KN    G   AVM  Q +    +
Sbjct: 38  CAACHGMDGIAVIPG-YPNLKGQSEQYLISSVKAY--KNKERTGGLAAVM--QAQAMMLS 92

Query: 200 TAELKTLATYISSL 213
             ++  LA Y +SL
Sbjct: 93  DEDIANLAAYYASL 106