Pairwise Alignments

Query, 230 a.a., Putative periplasmic cytochrome type-C oxidoreductase signal peptide protein (EC 1.-.-.-) from Variovorax sp. SCN45

Subject, 205 a.a., cytochrome c4 from Vibrio cholerae E7946 ATCC 55056

 Score = 80.5 bits (197), Expect = 2e-20
 Identities = 60/213 (28%), Positives = 91/213 (42%), Gaps = 16/213 (7%)

Query: 8   MFALAVACVTVSAEAQQVTGKAQDGAKKVAMCVGCHGIIGYQASFPEIHKVPMIAGQSAT 67
           M  LA+    +++ +    G  + G  K   C  CHG  G       +   P +AGQ   
Sbjct: 1   MKKLALILSVLASCSVWAQGSIEAGKAKSLTCAACHGADGNSP----LTIYPKLAGQHEK 56

Query: 68  YITAALTAYKGG-------DRKHPTMRAIADTLTEQDIADLAAYYSQLGLKDGGAPPATL 120
           Y+   L   K G        R  P M A+A  L+++DIADLAAYY+ + +     P   +
Sbjct: 57  YLEKQLKELKLGASSGGKQGRYDPVMSAMAMPLSDEDIADLAAYYASMPISGNTTPEDVV 116

Query: 121 AKATPANVEALITRNADNSCTKCHGANFNTPNDGTVPKLAGQHADYLFVALKSYRVKNNP 180
           A+          +R    +C  CHG   N       PK++GQHADY+   L+ +R  +  
Sbjct: 117 AQGKVLYTAGDASRGL-TACIACHGPRGNGTELSGFPKISGQHADYIKAQLEKFR--SGT 173

Query: 181 HLGRSNAVMGQQVEEKKFTTAELKTLATYISSL 213
                N +M       K T A++  L+ Y+  L
Sbjct: 174 RANDMNEMMRDVAH--KLTDADIDILSKYVGGL 204



 Score = 47.0 bits (110), Expect = 3e-10
 Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 5/92 (5%)

Query: 139 SCTKCHGANFNTPNDGTVPKLAGQHADYLFVALKSYRV--KNNPHLGRSNAVMGQQVEEK 196
           +C  CHGA+ N+P     PKLAGQH  YL   LK  ++   +    GR + VM       
Sbjct: 31  TCAACHGADGNSPLT-IYPKLAGQHEKYLEKQLKELKLGASSGGKQGRYDPVMSAMA--M 87

Query: 197 KFTTAELKTLATYISSLPGELKTVPESRIHHG 228
             +  ++  LA Y +S+P    T PE  +  G
Sbjct: 88  PLSDEDIADLAAYYASMPISGNTTPEDVVAQG 119