Pairwise Alignments

Query, 645 a.a., Outer membrane component of TAM transport system from Variovorax sp. SCN45

Subject, 594 a.a., outer membrane protein from Caulobacter crescentus NA1000

 Score =  105 bits (262), Expect = 6e-27
 Identities = 125/575 (21%), Positives = 229/575 (39%), Gaps = 71/575 (12%)

Query: 105 TEISRLMVAAEANARELLGTLGYFTPTLTLELNETPQGAKAPREIVITVSPGELTKVSNV 164
           +E  R    A  +A  +L   GY+  T+  ++ E       P   ++ ++PG    +++ 
Sbjct: 57  SEARRRARQAGEDAIAVLRAEGYYAYTVEPDVTEGD-----PPRAIVRITPGPAFLLADP 111

Query: 165 QISYGGPIADDATAEAQRDSIRTAWALRAGQPFTQQAWDEAKTTALRSLTAKRFPTGNIE 224
            I + G   D    E  R     A  L  G+P        A+   +  +    +     E
Sbjct: 112 HIDWSGSPPD----EGVRQRAVAAMRLTEGEPGRSADVVGAEGRIVAQVAKLGYADVAAE 167

Query: 225 ISRAEVDADRHEARLSVTYQSGPAYKFGPLVLRGIQRYDPDGARRIARLPSGQDYDQQKL 284
                VD      R +    +G   +   + +    R +P+   R+A   +G  YD + +
Sbjct: 168 PREVVVDHADRTVRPTFRIMAGELVRLNGVDVVTKGRTNPEWVGRLAPWVAGDVYDPEDV 227

Query: 285 LDAQQRLASSGYYDSVFLTLDTESGNPLAA-----PVIAQLREAPLQKVVLGAGFTTDNG 339
            + ++RL  +  YDS+ ++L   +G   A+     PV+  L +   + + LGAG++T  G
Sbjct: 228 AELERRLRDTAVYDSISVSL---AGTDKASAEGYRPVVVTLSDRRARTIELGAGYSTSEG 284

Query: 340 PRLSVDHIHNQVPLLGWRAVSRLSVDRDIKSLSTELNAIPDDHGWR------------WF 387
             +    I              L   +  + L  E++ +P    WR            + 
Sbjct: 285 AGVDARWIRYNRQKRADTTTYALRFAKLEQRLGAEIS-LPH---WRRPQQTLKLNSSVFR 340

Query: 388 SGAELKSEQSGSYVVDSGRLRGGRNKSSDHIDRSYFLQYDYAQNR----------GTNAP 437
           +  +  +E   +  VD  R    R +++ +  R++ + +D +Q +          G    
Sbjct: 341 NDTDAYNETGATVGVDLTR----RRQTTAY--RTFGVSFDLSQTKEQVNRNGLIAGRKLN 394

Query: 438 PSASAVTANWGWTGRYFDNNSAPSRGFGIALEVAAGYTLTGMQTPFTRTYARWLGVLPLG 497
            +  A  A + W   + D+   P RG+ +       Y       P+ +   +    LP G
Sbjct: 395 LATLAGLAAYAWD--FSDDILDPKRGWRLETRAEPTYVAGDTSVPYLKLAGQGSAYLPFG 452

Query: 498 SSDDKETNARRSRLQLRLEGGAVAAKDSAQIPSTLMFLTGGDTTVRGYSYKQIGTVRPDG 557
             D        + L  R++ GA+       +P++  F +GG  +VRGY+Y+ IG    D 
Sbjct: 453 KQDS-------TVLAARVKLGAILGAGLLDVPASRRFFSGGGGSVRGYAYQAIGPRLSDN 505

Query: 558 TTVAGRYLGVASVEWQRPVVYNNKLTD-WESVVFVDAGAVA--DKPAELKPKVGVGVGAR 614
           T   G  L   S E         K+TD W  V FVDAGA+   + P     + G G+G R
Sbjct: 506 TPQGGISLVETSFE------VRQKITDRWSGVAFVDAGAIGTHETPQREDFRAGAGLGVR 559

Query: 615 WRSPVGPVQADLAYGVDSK----RFRLHFRLGFTF 645
           +    GP++AD+A  +  +    +F+++  +G +F
Sbjct: 560 YDLGFGPIRADIAAPLGRRKGDPKFQIYLSIGQSF 594