Pairwise Alignments

Query, 645 a.a., Outer membrane component of TAM transport system from Variovorax sp. SCN45

Subject, 770 a.a., membrane protein from Burkholderia phytofirmans PsJN

 Score = 62.8 bits (151), Expect = 6e-14
 Identities = 111/547 (20%), Positives = 201/547 (36%), Gaps = 63/547 (11%)

Query: 117 NARELLGTLGYFTPTL-TLELNETPQGAKAPREIVITVSPGELTKVSNVQISYGGPIADD 175
           N R      GY    + + +++ TP   K    + +T+  GE   +SN++++  G + D 
Sbjct: 231 NVRSYYLNRGYLEFNIESTQVSITPD--KKDMYLTVTLHEGEPYTISNIKLA--GNLLD- 285

Query: 176 ATAEAQRDSIRTAWALRAGQPFTQQAWDEAKTTALRSLTAKRFPTGNIEISRAEVDADRH 235
                +   +     ++ G  F+ +         +  L    +    +  ++ ++D   H
Sbjct: 286 -----REPELAKLIKIKPGDRFSAEKLQATTKAIVDKLGEYGYAFATVN-AQPQIDQANH 339

Query: 236 EARLSVTYQSGPAYKFGPLVLRGIQRYDPDGARRIARLPSGQDYDQQKLLDAQQRLASSG 295
           +  L++            + + G  R   +  RR  R      +D  +L  ++ R+   G
Sbjct: 340 KVDLTLQVDPSRRVYVRRINVVGNTRTRDEVVRREMRQLESSWFDSNRLALSKDRINRLG 399

Query: 296 YYDSVFLTLDTESGNPLAAPVIAQLREAPLQKVVLGAGFTTDNGPRLSVDHIHNQVPLLG 355
           Y+  V +T     G P    V  ++ E P   + LGAGF++ +   LS     + V   G
Sbjct: 400 YFTDVDVTTVPVEGTPDQVDVDVKVAEKPTGAITLGAGFSSTDKVVLSAGVSQDNVFGSG 459

Query: 356 WRAVSRLSVDRDIKSLSTE----------LNAIPDDHGWRWFSGAELKSEQSGSYVVDSG 405
                 ++  +  ++L+            +  I D + +R +      ++ S   V   G
Sbjct: 460 TSLSVNVNTAKTYRTLTVTQVDPYFTVDGIKRITDVY-YRTYQPLYYSTDSSFKIVTIGG 518

Query: 406 RLRGGRNKSSDHIDRSYFLQYDYAQNR---GTNAPPS-----------ASAVTANWGWTG 451
            L+ G   S   +D  YF      QN+     N P S           ++ V    GW+ 
Sbjct: 519 DLKFGIPFS--EVDTVYF-GAGLEQNQLDVDANTPASYRQYVQDFGRVSNNVPITVGWSR 575

Query: 452 RYFDNNSAPSRGFGIALEVAAGYTLTGMQTPFTRTYARWLGVLPLGSSDDKETNARRSRL 511
              D+   PSRG+        G  +   Q       A++             + AR   L
Sbjct: 576 DARDSALVPSRGYFAQANAEYGTPIGSTQYYKADINAQYY-----------YSFARGFVL 624

Query: 512 QLRLEGGAVAAKDSAQIPSTLMFLTGGDTTVRGYSYKQIGTVRPDGTT---VAGRYLGVA 568
               +GG          P    +  GG  +VRGY    +G    D TT   + G  L V 
Sbjct: 625 GFNFQGGYGKGMGGKPYPIFKNYYAGGIGSVRGYEPSSLGP--RDATTNDPIGGSKLLVG 682

Query: 569 SVEWQRPVV---YNNKLTDWESV----VFVDAGAVADKPAELKPKVGVGVGARWRSPVGP 621
           ++E   P+    Y+  L  +  +    V+ DA + A        + G G+G  W SP+GP
Sbjct: 683 NIELTFPLPGTGYDRTLRVFTFLDAGNVWADASSAATSTGANGLRYGYGIGLAWISPIGP 742

Query: 622 VQADLAY 628
           ++  L +
Sbjct: 743 LKLSLGF 749



 Score = 26.2 bits (56), Expect = 0.006
 Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 7/69 (10%)

Query: 256 LRGIQRYDPDGARRIARLPSGQDYDQQKLLDAQQRLASSGYYDSVFLTLDTESGNPLAAP 315
           + G+QR +P        +  G  +   K  +A + L ++G+++ V +  +   GN     
Sbjct: 37  IEGLQRVEPGTVFAYLPIKQGDTFSDDKASEAIRALYATGFFNDVKIATE---GN----V 89

Query: 316 VIAQLREAP 324
           VI Q+ E P
Sbjct: 90  VIVQVLERP 98