Pairwise Alignments

Query, 645 a.a., Outer membrane component of TAM transport system from Variovorax sp. SCN45

Subject, 591 a.a., surface antigen (D15) (RefSeq) from Shewanella sp. ANA-3

 Score =  130 bits (328), Expect = 1e-34
 Identities = 141/594 (23%), Positives = 244/594 (41%), Gaps = 78/594 (13%)

Query: 99  LDDLGA---TEISR--LMVAAEANARELLGTLGYFTPTLTLELNETPQGAKAPREIVITV 153
           L  LGA   +E+ R   +   E N    L ++GY+   +  +L E  +G   P E+ +TV
Sbjct: 23  LAHLGAMPDSEVQRRAFLFNVEDNVSTALESMGYYHGEVEEQLVEKEKG---PWELKLTV 79

Query: 154 SPGELTKVSNVQISYGGPIADDATAEAQRDSIRTAWALRAGQPFTQQAWDEAKTTALRSL 213
             GE  K+  V I++ G + DD   +     +     ++ G       + + K+  +   
Sbjct: 80  KAGEPVKIQWVDINFSGEMLDDRAFDKWLAEVN----IKPGDTLNHGVYADVKSQLVTLA 135

Query: 214 TAKRFPTGNIEISRAEVDADRHEARLSVTYQSGPAYKFGPLVLRGIQRYDPDGARRIARL 273
            A+ +  G    S+ +++ D + A++S+ + SG  Y+FG +   G    +PD   ++   
Sbjct: 136 LARGYFDGEFTESQIKINRDLNTAQISLHFNSGARYRFGQVSFEG-HTLEPDILTKLIPF 194

Query: 274 PSGQDYDQQKLLDAQQRLASSGYYDSVFLTLDTESGNPLAAPVIAQLREAPLQKVVLGAG 333
                Y  +++    ++L  +GY+ ++ +    +       PV  +L       + LG G
Sbjct: 195 KEDAAYSTRRVSSLNRQLLDTGYFANIKVIPQIDQAKDNQLPVKVELTNKASHSIELGLG 254

Query: 334 FTTDNG------PRLSVDHIHNQVPLLGWRAVSRL--SVDRDIKSLST------------ 373
                       PR+ V     Q+   G    + L  S DR  K L+T            
Sbjct: 255 GDIGQSADKTFDPRVRVTWRTPQINKYGHSQETSLEWSPDRP-KFLTTYTIPLTHPLDDQ 313

Query: 374 ---ELNAIPDDHGWRWFSGAELKSEQSGSYVVDSGRLRGGRNKSSDHIDRSYFLQY---- 426
               L  + D +G       E +  ++   +  +  L G   +    +D  + + Y    
Sbjct: 314 LKIRLGLLRDKYGVTQIYEPENRDFRNTGQLESTKYLLGLLRQQ--RLDNQWLMTYSLDA 371

Query: 427 ---DYAQNRGTNAPPSASAVTANWGWTGRYFDNNSAPSRGFGIALEVAAGYTLTGMQTPF 483
              +Y Q+  T+  PS      N+  T R  DN+  P  GF     +       G +T  
Sbjct: 372 IREEYTQS-DTDYSPSFYLAGINFSKTTRG-DNSLDPKSGFRQMYSLDYADPYLGSETRL 429

Query: 484 TRTYARWLGVLPLGSSDDKETNARRSRLQLRLEGGAVAAKDS--AQIPSTLMFLTGGDTT 541
            R  A++  +         +T     R+  R++  A  A ++  A IP +L +  GGD T
Sbjct: 430 ARLQAKFKWI---------DTFFDNHRIVARMDLAANLANENELAFIPPSLRYFAGGDQT 480

Query: 542 VRGYSYKQIGT----VRPDG----TTVAGRYLGVASVEWQRPVVYNNKLTDWESVVFVDA 593
           +RGY Y+++G     +  DG      + GRYL V S+E+Q  V        W    FVDA
Sbjct: 481 IRGYGYQELGPYLDYIDADGKVNREVIGGRYLMVGSLEYQYYVT-----PTWRVATFVDA 535

Query: 594 GAVADKPAELKPKVGVGVGARWRSPVGPVQADLAYGVD-----SKRFRLHFRLG 642
           G   D   + +P V VG G  W SP+GP++ DL  G+       + +R+H  +G
Sbjct: 536 GNAFDN-NQFEPVVSVGGGIHWISPIGPIKLDLGVGLKETDTIDRSWRIHLTMG 588