Pairwise Alignments

Query, 290 a.a., Permease of the drug/metabolite transporter (DMT) superfamily from Variovorax sp. SCN45

Subject, 330 a.a., hypothetical protein from Synechococcus elongatus PCC 7942

 Score =  109 bits (272), Expect = 9e-29
 Identities = 84/281 (29%), Positives = 131/281 (46%), Gaps = 4/281 (1%)

Query: 1   MLLAMVLWGVNVSAVKALTTSFESLPLASLRMVVACLALSAIVLWRRGGVPALGARQLAA 60
           + +A  LWG   +A +        L +A  R ++A   L  ++LW+R G P L  RQ   
Sbjct: 24  LAIATALWGGTFTAGRIAVQQLSPLAVACGRYLLATTVL-LLILWQREGWPPLNRRQQLL 82

Query: 61  MTGCAFLMVYANQILFAQGLLRSTATNGALIMALSPLVSALMAALVFRERFTPRRMLGVA 120
           + G     +     LF  GL    A+  ALI+AL+P   AL AA+   +R    +  GV 
Sbjct: 83  LFGLGVSGIALYNWLFFIGLSLIPASRAALIIALNPTAIALGAAIWTGDRLRSWQWAGVG 142

Query: 121 LGFAGVAAVVLSHPGAGLSRAGIGDLMLALAVVSFAVGGVGVQRLARQIDPLSISWVIYM 180
           L   G   ++ S     L+  G GDL L   V+ + V  +  ++  R + PL+++     
Sbjct: 143 LSLIGAILLLGSRQAGALTLPGWGDLALVGCVLCWTVYSLLARQALRSLSPLTVTTGACC 202

Query: 181 IGTAMLVLHTLLGPSRLGTAELFPGAWPWALVLFSGIAATAAGNLIWNRAISVIGVARTA 240
            G+ +L+   L   ++L     F      + + F G+  TA    ++   I  +G AR  
Sbjct: 203 WGSVLLIGLWLGQGAQLPVNVSFSTG---SAIAFLGLGGTALAFCLYANGIERLGAARAG 259

Query: 241 VFLYWVPVFGVAFAALLLGEVLTWWHLFGFVAVMSGTWLGT 281
           +F+  VPVFG A  ALLL E L+   L G + V++G  LGT
Sbjct: 260 LFINLVPVFGSAIGALLLQEPLSGLTLLGGLLVLAGVGLGT 300