Pairwise Alignments

Query, 399 a.a., ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 434 a.a., ABC-type branched-chain amino acid transport system, periplasmic component from Dechlorosoma suillum PS

 Score = 90.5 bits (223), Expect = 8e-23
 Identities = 93/340 (27%), Positives = 143/340 (42%), Gaps = 13/340 (3%)

Query: 14  AAFAAFTAGASAQDIKLGYNGDLSASPSAQSGQAAVLGMEAAIADINAAGGVLGK---KL 70
           AA AA  A      +K+G+   L+  P A  G+    G   AI ++NA G  +G    K 
Sbjct: 32  AAPAAAPAAKPEITVKIGHASPLTG-PQAHIGKDNEYGATLAIEELNAKGLEIGGAKVKF 90

Query: 71  ALVTRDDVSAPPKSIQNMSDLIDNEKVVAVFGPTNSGNAMAWKHIANQKKIPVLGNVGSG 130
            L++ DD  A PK    ++    + KV  V G  NSG  +    I     IP +    + 
Sbjct: 91  ELISDDD-QADPKQGTTVAQKFVDAKVNGVIGHLNSGTTIPASKIYFDAGIPQISGSATN 149

Query: 131 TDITKPMSPGADNYMFRVSMVDREQVAALMAYVKKNTAGSKVVGLMAETTGYGQGGLKDM 190
              TK     A    FRV   D +Q  AL  +  K T  +K V ++ + T YGQG   + 
Sbjct: 150 PTYTKQGFATA----FRVMANDEQQGKALAQFAAK-TLAAKSVAIIDDRTAYGQGLADEF 204

Query: 191 EEIAKLQDIKIAATERFGVGDTDMTSQLSKMKAANVDTVVVWAQGTPIAQLVRSMEKINY 250
           ++ A+   +K+ A+E      TD  + L+K+K+   D +           + + M+++  
Sbjct: 205 KKAAEAAGLKVVASEYTNDKATDFKAILTKIKSKKPDLIFYGGMDPQGGPMAKQMKELGL 264

Query: 251 FPLTLTSWAADNITFYDAAGKALAEKPIFMRTVSETRTPAQQKLFDRIGTKLKAPGSFSF 310
               LT        F   AG A   +   +  V   + P      D+   K K      +
Sbjct: 265 KAKFLTGDGGCTPNFITLAGAAAEGQYCSLPGVPLDKMPGGTVFKDKFVGKFKTEIQL-Y 323

Query: 311 ALHGYDSMQLLAQAMKQANSTDGAAVRAALEDLKTPVQGV 350
           A + YD+  +L  AMK+ANS + A  +   E  KT  QGV
Sbjct: 324 APYVYDATMVLVDAMKRANSVEPA--KYLPEIGKTSFQGV 361