Pairwise Alignments

Query, 363 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 347 a.a., Transcriptional regulator, AraC family from Pseudomonas fluorescens FW300-N2E2

 Score =  115 bits (288), Expect = 2e-30
 Identities = 88/324 (27%), Positives = 149/324 (45%), Gaps = 17/324 (5%)

Query: 30  LTQSGASASELLRGTGLDESELLSYSRKVSYAQMQTILRNAVALSPGPEAAFEAGRRVSL 89
           +   G  A+ L RG G    +L   ++++S+ Q   +++ A+ L P        G R  L
Sbjct: 27  VADKGFDAASLCRGLGFGLDDLQDPAQRISHRQAVVMIQRALKLLPDQGLGLWVGDRNVL 86

Query: 90  ASLGVWGLGMTSARTYRELAEFVVKYQWVLGPMVAFDFHEVDANAWWTYTPLLVSDPRST 149
            +LG+ G  ++   T R+     V+YQ   G +      E         T  L   P + 
Sbjct: 87  GTLGLLGHVLSLCETLRDAFALGVRYQHTTGGIAVTSVEEATGRIMVEATCRL---PFAE 143

Query: 150 EYQMSME--FALCMGYRMSEIAFGPGFKALAISLRYDAPAHASLYEHFFGCPILFGQPHD 207
               ++E  FA  M Y       GP FK LA+   + AP++A  Y+   G  + FG  H+
Sbjct: 144 IQVFAVEEFFASLMVY--GRALAGPDFKPLAVEFMHAAPSYAQEYQWILGPDVHFGCRHN 201

Query: 208 GFHFDPALLECELPNANAISMAMVRAGCEVLLKKLSTRGGIEARVRELLSAQRPEKPALA 267
               D   L+  LPN + +++    A    LL++ +T   +  ++  + + +R     L 
Sbjct: 202 RMLIDVRWLDMRLPNHHPLALRQALA----LLEQEATE--VHQKIDLIQTVERAIARDLT 255

Query: 268 ----VDEIANELDMNPRTLHRKLKEAGTSFRGLRSNVLMDQAIAYLRDTDLTQEEIAARL 323
               +++IA +L+M+ RTL R+L E   +F  L   V   + +  L + +L+ E I   +
Sbjct: 256 RGSHIEKIAGDLNMSSRTLRRRLSEHNLTFETLLEQVRRSRTLNLLANPELSIERITEEV 315

Query: 324 GFSDGSNFRQAFKRWTNRQPGDFR 347
           G+SD  +FR+AF+RWT   P  FR
Sbjct: 316 GYSDVRSFRRAFRRWTGMSPSAFR 339