Pairwise Alignments

Query, 2069 a.a., Signal transduction histidine kinase CheA from Variovorax sp. SCN45

Subject, 761 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

 Score =  171 bits (432), Expect = 5e-46
 Identities = 107/345 (31%), Positives = 177/345 (51%), Gaps = 7/345 (2%)

Query: 1549 LQKTVQATEDDLSVQARQTRELQRGLLRTRMVEFEGISDRLYRVVRQASKDTGKQVRLDI 1608
            ++K  Q  + + SV +R   +LQ  +++ RMV    +  R  R++R  S+  GKQV L I
Sbjct: 409  VRKLAQDIKAEQSVISRLAEDLQSVVMQVRMVPLATVFQRYPRLIRDISRKLGKQVDLII 468

Query: 1609 VGGSIEMDRGVLDRMTPAFEHLLRNCVAHGIEDAAAREKAGKDASGLIVIDLHHEGNDVS 1668
             G   E D+ +++ ++    HL+RN + HGIE    R + GK+ +G I +      + V 
Sbjct: 469  EGEDTEADKSIVEDLSEPLVHLIRNALDHGIESPDIRREQGKNPTGKITLSAFTLDDSVI 528

Query: 1669 VSFRDDGAGLDRKRIAERARVLGLIGAD--QELSAEEATELIFKPGFSTAGQVSELAGRG 1726
            +   DDG G+D +R+  +A   GL+ A   + +S +E   LIF+PGFST  QVS+L+GRG
Sbjct: 529  IKMSDDGKGVDVERVKTKALERGLVEASKLERMSQQEIIHLIFEPGFSTVEQVSDLSGRG 588

Query: 1727 IGMDVVRAQIAALGGRIETHSTPGQGTTFKLVLPLTTAVTHVVMLRAGEVSIGVPSNLVE 1786
            +GMD VR  I   GG +   S PG+G+   ++LPL+  ++ V+M    + S  +P   V 
Sbjct: 589  VGMDAVRTAIERNGGTLTLSSEPGKGSEITMILPLSMTISRVMMFELEQQSFAIPIESVI 648

Query: 1787 LVQRVSGTDLDAAYLHNSHPF--GSEQVPFYWAGALLQASTRSEHAAAKNNTLVVVRSAA 1844
               ++S    D   + N   F    E VP  +     + ++   +   +   ++VVR   
Sbjct: 649  QTLKIS-RHKDIRRVKNLDTFILRGETVPILYLKRAFEMNSAQIYPDIQ--PILVVRVGD 705

Query: 1845 QRVALHVDEVLGNQEVVVKNLGPQLARLPGLAGISVLASGAVALI 1889
              + L VD +   Q+V++K L   LA      G +++  G V L+
Sbjct: 706  DVLGLAVDRLQEGQDVIIKPLEGALATFSIYRGAAIMGDGRVLLV 750



 Score = 42.7 bits (99), Expect = 2e-07
 Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 2/121 (1%)

Query: 666 LQNIFLDEAREVVQNGLEAIAELASYPDDTEELTILRRAFHTLKGSSRMV-GLTEFGDAA 724
           +QN F+ E+R+++++    +  L + PDD   +  L R  HT+KG+S ++  +  F   A
Sbjct: 5   MQN-FIIESRDLIESAARGLLALEANPDDKAIINELFREIHTVKGASGILDNIAPFTQLA 63

Query: 725 WSLEQVLNTWLADQRAATPELLSGTERTLREFSEWVEAIAAGQPHSWQAASFSRVANALL 784
             +E ++        A    +L        +F  W+E +   Q  S +A S S+   A L
Sbjct: 64  HRMEDLMQKVRDGHVALNGTMLDLMLGCCDQFLLWIEELEQHQELSAEAVSISKQMIAQL 123

Query: 785 A 785
           A
Sbjct: 124 A 124



 Score = 33.1 bits (74), Expect = 2e-04
 Identities = 32/136 (23%), Positives = 54/136 (39%), Gaps = 4/136 (2%)

Query: 1266 EAAELLPQLGESLRQWAHHPDDSAPRAAVLRTLHTLKG-SARLAGAMRLGERAHRMESEI 1324
            E+ +L+      L     +PDD A    + R +HT+KG S  L       + AHRME  +
Sbjct: 11   ESRDLIESAARGLLALEANPDDKAIINELFREIHTVKGASGILDNIAPFTQLAHRMEDLM 70

Query: 1325 ELL--GSQGAERADIEKLLGRLDALQATFDALRAADDATQVELAQLVASASASAPAAQLV 1382
            + +  G        ++ +LG  D      + L    + +   ++      +  AP  Q  
Sbjct: 71   QKVRDGHVALNGTMLDLMLGCCDQFLLWIEELEQHQELSAEAVSISKQMIAQLAPLTQAA 130

Query: 1383 QV-APEAGVPANDESA 1397
                P   V A +E+A
Sbjct: 131  PTHTPTPAVAAQEETA 146