Pairwise Alignments

Query, 2069 a.a., Signal transduction histidine kinase CheA from Variovorax sp. SCN45

Subject, 758 a.a., CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt from Pseudomonas syringae pv. syringae B728a

 Score =  187 bits (474), Expect = 6e-51
 Identities = 198/819 (24%), Positives = 331/819 (40%), Gaps = 117/819 (14%)

Query: 1100 YLNEADEWSRQLATDVGEWALESHERLPDSTVALA---HSLAGSSATVGFHSLSGMARLF 1156
            +L EA E   QL+  + E  LES     D   A+    H++ G +  +  H L     + 
Sbjct: 13   FLVEAGEILEQLSEQLVE--LESRPDDADLLNAIFRGFHTVKGGAGFLQLHELVECCHIA 70

Query: 1157 ESALQHLQMQGSGSREQGM-VLVAAADELRRLLHQFAVGFLRDPAEGTLQALRDIANSPM 1215
            E+    L+        + M V++ A D +  +  Q        PA   L A       P 
Sbjct: 71   ENVFDILRKGERRVDSELMDVVLEALDTVNSMFGQVRERTDVTPATPELLAALARLAEPQ 130

Query: 1216 PTEIAMRAEARPLQQVVSSDSIADVALDDSEDAIDLADAVDVDLFPIFEEEAAELLPQLG 1275
              + A+  E  P+ +V ++  +A+ A  D                 I ++E  +LL  L 
Sbjct: 131  SADEAVAPEPEPVVEVQAAAPVAEPAAGDE----------------ITDDEFEQLLDSLH 174

Query: 1276 ESLRQWAHHPDDSAPRAAVLRTLHTLKGSARLAGAMRLGERA--HRMESEIELLGSQGAE 1333
             S       P  +AP             +   A A   G+       ES ++ L  +G  
Sbjct: 175  GS------SPVSAAPAQ-----------TPAAAAAAPAGDEITDQEFESLLDQLHGKGKF 217

Query: 1334 RADIEKLLGRLDALQATFDALRAADDATQVELAQLVASASASAPAAQLVQVAPEAGVPAN 1393
             AD           Q +  A  A+D+ T  E   L+            V  AP A  P  
Sbjct: 218  AADAATAPAPAPVAQGS--AAPASDEITDDEFEALLDQLHGKGSFDGAV-AAPVAAAPVA 274

Query: 1394 DESAAPVAGDEDGETADD-------------------IAAAAPA-TASALQPRPAPALLA 1433
              + AP A     E  D                    I A APA  A+A  P P P +  
Sbjct: 275  VAAKAPAAAAASDEITDHEFESLLDELHGKGKFEPEAIVAKAPAPAAAAAAPPPPPPVAK 334

Query: 1434 PLRAVSSQAVRIRTQLLDRLVAQTGEVIITRSRLEAELGQLRGSLADLTGNLDRLRQQLR 1493
            P  A +++A   +                  +R  A  G+                   +
Sbjct: 335  PAPAPAAKAEPAKPAAAP-----------AAARAPAPSGE-------------------K 364

Query: 1494 DIEVQAESQMQSRLAQAKDSQQSFDPLEFDRFTRVQELTRMMAESVNDVATVQRT-LQKT 1552
             +  +AE+ ++   A                  R+ E+  M+ E V     + R  L   
Sbjct: 365  PVATEAETTVRVDTA------------------RLDEIMNMVGELVLVRNRLVRLGLNSG 406

Query: 1553 VQATEDDLSVQARQTRELQRGLLRTRMVEFEGISDRLYRVVRQASKDTGKQVRLDIVGGS 1612
             +A    +S     T +LQ  +++TRM   + +  R  R+VR  ++   K++ L++VG  
Sbjct: 407  DEAMSKAVSNLDVVTADLQTAVMKTRMQPIKKVFGRFPRLVRDLARQLKKEINLELVGEE 466

Query: 1613 IEMDRGVLDRMTPAFEHLLRNCVAHGIEDAAAREKAGKDASGLIVIDLHHEGNDVSVSFR 1672
             ++D+ +++ +     HL+RN V HGIE    RE  GK   G +++    EG+ + +S  
Sbjct: 467  TDLDKNLVEALADPLVHLVRNAVDHGIETPEEREATGKSRGGRVILSAEQEGDHILLSIS 526

Query: 1673 DDGAGLDRKRIAERARVLGLIGAD--QELSAEEATELIFKPGFSTAGQVSELAGRGIGMD 1730
            DDG G+D   +   A   G++  D    LS  +   LIF PGFST  ++S+++GRG+GMD
Sbjct: 527  DDGKGMDPNVLRSIAVKRGVMDKDAADRLSDTDCYNLIFAPGFSTKTEISDVSGRGVGMD 586

Query: 1731 VVRAQIAALGGRIETHSTPGQGTTFKLVLPLTTAVTHVVMLRAGEVSIGVPSNLVELVQR 1790
            VV+ +I+ L G I  +ST GQG+   + +PLT A+   +M+  G  +   P   V  +  
Sbjct: 587  VVKTKISQLNGSINIYSTKGQGSKIVIKVPLTLAIMPTLMVMLGNQAFAFPLVNVNEIFH 646

Query: 1791 VSGTDLDAAYLHNSHPFGSEQVPFYWAGALLQASTRSEHAAAKNNTLVVVRSAAQRVALH 1850
            ++ +  +            + +P ++    L +S  + H   +   +V++    QR+   
Sbjct: 647  LNLSTTNVVDGQEVVIVRDKALPLFYLKRWLVSS--AAHEEQREGHVVILTVGTQRIGFV 704

Query: 1851 VDEVLGNQEVVVKNLGPQLARLPGLAGISVLASGAVALI 1889
            VD+++G +EVV+K LG  L   PG++G ++   G +ALI
Sbjct: 705  VDQLVGQEEVVIKPLGKMLQGTPGMSGATITGDGRIALI 743



 Score = 83.6 bits (205), Expect = 1e-19
 Identities = 117/400 (29%), Positives = 153/400 (38%), Gaps = 66/400 (16%)

Query: 662  EEDDLQNIFLDEAREVVQNGLEAIAELASYPDDTEELTILRRAFHTLKGSSRMVGLTEFG 721
            +E+ LQ+ FL EA E+++   E + EL S PDD + L  + R FHT+KG +  + L E  
Sbjct: 6    DEEILQD-FLVEAGEILEQLSEQLVELESRPDDADLLNAIFRGFHTVKGGAGFLQLHELV 64

Query: 722  DAAWSLEQVLNTWLADQRAATPEL----LSGTERTLREFSEWVEAIAAGQPHSWQAASFS 777
            +     E V +     +R    EL    L   +     F +  E            A+ +
Sbjct: 65   ECCHIAENVFDILRKGERRVDSELMDVVLEALDTVNSMFGQVRERTDVTPATPELLAALA 124

Query: 778  RVANALLAGEPV-PPPVRVADAEALAVAARHIAAE-----------------TPV-AAPA 818
            R+A    A E V P P  V + +A A  A   A +                 +PV AAPA
Sbjct: 125  RLAEPQSADEAVAPEPEPVVEVQAAAPVAEPAAGDEITDDEFEQLLDSLHGSSPVSAAPA 184

Query: 819  VAPLPMPALP------DLPDLSLTPEPVSHVEPVAHVAPEPVPEPALEPLDWHAPAQSPE 872
              P    A P      D    SL  +     +  A  A  P P P  +     APA    
Sbjct: 185  QTPAAAAAAPAGDEITDQEFESLLDQLHGKGKFAADAATAPAPAPVAQ--GSAAPASDEI 242

Query: 873  VDDDFASTDFIDFESKQNTEPAPLLSLPSGDEFDFLAPAKTQARAEPEPVVPPAAEPEVP 932
             DD+F                A L  L     FD        A A P    P A   + P
Sbjct: 243  TDDEF---------------EALLDQLHGKGSFD-------GAVAAPVAAAPVAVAAKAP 280

Query: 933  AEPVASVETESPAATSLPDFVWEPEPEPEPVPVPAQAQEPEVIEAARPPHEEEPKPELQL 992
            A   AS E       SL D +   + + EP  + A+A  P    AA PP    P P    
Sbjct: 281  AAAAASDEITDHEFESLLDEL-HGKGKFEPEAIVAKAPAPAAAAAAPPP----PPP---- 331

Query: 993  AAEPEQAPEAAAEP-EPEPAPAAIEAAPEPEPEPAPVIAE 1031
             A+P  AP A AEP +P  APAA   AP P  E  PV  E
Sbjct: 332  VAKPAPAPAAKAEPAKPAAAPAAAR-APAPSGE-KPVATE 369



 Score = 72.0 bits (175), Expect = 3e-16
 Identities = 60/191 (31%), Positives = 85/191 (44%), Gaps = 14/191 (7%)

Query: 1256 DVDLFPIFEEEAAELLPQLGESLRQWAHHPDDSAPRAAVLRTLHTLKGSARLAGAMRLGE 1315
            D ++   F  EA E+L QL E L +    PDD+    A+ R  HT+KG A       L E
Sbjct: 6    DEEILQDFLVEAGEILEQLSEQLVELESRPDDADLLNAIFRGFHTVKGGAGFLQLHELVE 65

Query: 1316 RAHRMESEIELLGSQGAERADIEKL---LGRLDALQATFDALRAADDATQVELAQLVASA 1372
              H  E+  ++L  +G  R D E +   L  LD + + F  +R   D T      L A A
Sbjct: 66   CCHIAENVFDIL-RKGERRVDSELMDVVLEALDTVNSMFGQVRERTDVTPATPELLAALA 124

Query: 1373 SASAPAAQLVQVAPEAGVPANDESAAPVA---------GDEDGETADDIAAAAPATASAL 1423
              + P +    VAPE       ++AAPVA          DE  +  D +  ++P +A+  
Sbjct: 125  RLAEPQSADEAVAPEPEPVVEVQAAAPVAEPAAGDEITDDEFEQLLDSLHGSSPVSAAPA 184

Query: 1424 QPRPAPALLAP 1434
            Q  PA A  AP
Sbjct: 185  Q-TPAAAAAAP 194



 Score = 28.9 bits (63), Expect = 0.003
 Identities = 54/219 (24%), Positives = 75/219 (34%), Gaps = 19/219 (8%)

Query: 1770 MLRAGEVSIGVPSNLVELVQRVSGTDLDAAYLHNSHPFGSEQVPFYWAGALLQASTRSEH 1829
            ++ AGE+   +   LVEL  R    DL  A     H               LQ     E 
Sbjct: 14   LVEAGEILEQLSEQLVELESRPDDADLLNAIFRGFHTVKG-------GAGFLQLHELVEC 66

Query: 1830 AAAKNNTLVVVRSAAQRVALHVDEVLGNQEVVVKNLGPQLARLPGLAGISVLASGAVALI 1889
                 N   ++R   +RV   + +V+      V ++  Q+     +   +     A+A +
Sbjct: 67   CHIAENVFDILRKGERRVDSELMDVVLEALDTVNSMFGQVRERTDVTPATPELLAALARL 126

Query: 1890 YNPVA---LAAVHGEQARERQAAALAAAPA---RAAAAEAEQGVP----QEPVVLAPV-T 1938
              P +     A   E   E QAAA  A PA        E EQ +       PV  AP  T
Sbjct: 127  AEPQSADEAVAPEPEPVVEVQAAAPVAEPAAGDEITDDEFEQLLDSLHGSSPVSAAPAQT 186

Query: 1939 PQIPLVLVVDDSITVRRVTQRLLQREGYRVSLAADGLQA 1977
            P         D IT +     L Q  G +   AAD   A
Sbjct: 187  PAAAAAAPAGDEITDQEFESLLDQLHG-KGKFAADAATA 224