Pairwise Alignments

Query, 2069 a.a., Signal transduction histidine kinase CheA from Variovorax sp. SCN45

Subject, 924 a.a., hybrid sensor histidine kinase/response regulator from Synechocystis sp000284455 PCC 6803

 Score =  232 bits (592), Expect = 2e-64
 Identities = 234/860 (27%), Positives = 376/860 (43%), Gaps = 126/860 (14%)

Query: 1265 EEAAELLPQLGESLRQWAHHPDDSAPRAA----VLRTLHTLKGSARLAGAMRLGER---A 1317
            +E  EL   LGE L      P      A      +RT  T++  A L    R  ER   A
Sbjct: 128  DEPPELALALGEFLETCQPQPSQEEAIAGDVSQFVRTSLTVELEACLERVERRLERGGTA 187

Query: 1318 HRMESEIELLGSQGAERADIEKLLGRL---DALQATFDALRAADDATQVELAQLVASASA 1374
              +     LL  +         LLG+    D L+   +  R      QV+L  L+ +A A
Sbjct: 188  TELRESFSLLLEECT-------LLGQALSCDWLEEAGNRWRGELVRPQVDLLTLLPTAIA 240

Query: 1375 SAPAAQLVQVAPEAGVPANDESAAPVAGDEDGETADDIAAAAPATASALQPRPAPALLAP 1434
               + +   +A E   PA +  A P     D E   ++    P TA    P P   + A 
Sbjct: 241  ELRSLREQFLAGELTPPAPEIVAEP-----DPEPLPEVK---PVTAVIAPPVPGVPIPAV 292

Query: 1435 LRAVSS------QAVRIRTQLLDRLVAQTGEVIITRSRLEAELGQLRGSLADLTGNLDRL 1488
            + A +S      Q +RI    L++L     E++I + RL     QLR +    + NL R 
Sbjct: 293  VTAKASPAPSTRQTLRIPLDRLNKLSNTVSELLINQERLLEYDKQLRQA----SRNLKRR 348

Query: 1489 RQQLRDIEVQAESQM-------QSRLA-------QAKDSQQS--------FDPLEFDRFT 1526
             QQL  +  Q ES         Q++++       Q  DSQ S        FD LE D +T
Sbjct: 349  GQQLIPMREQVESLYDELSFSDQTKISPSNGGGNQNGDSQSSLGIAGLVDFDALEMDSYT 408

Query: 1527 -------RVQELTRMMAESVNDVATVQRTLQKTVQATEDDLSVQARQTRELQRGLLRTRM 1579
                   R QEL   + E   DV  V+R LQ+T       L   ++   +L   L ++R+
Sbjct: 409  AVHGILQRFQELMVQVQEIQEDVDLVERDLQET-------LIQMSQSLHQLDSELTQSRL 461

Query: 1580 VEFEGISDRLYRVVRQASKDTGKQVRLDIVGGSIEMDRGVLDRMTPAFEHLLRNCVAHGI 1639
            V F G++    + + +      K V+  I G +  ++  +LD++     HL+RN   HG+
Sbjct: 462  VPFRGLAQSFAQPLEKLGDRHKKPVQFVIEGENTLVEVAILDQLRTPLTHLIRNAFDHGL 521

Query: 1640 EDAAAREKAGKDASGLIVIDLHHEGNDVSVSFRDDGAGLDRKRIAERARVLGLIGADQ-- 1697
            E    R+  GK   G I +      N V ++  DDG G+D ++I+ +A  LG +  +Q  
Sbjct: 522  EFVPERQAQGKLPEGTITLSASTANNQVLITVSDDGRGIDPEKISRKAMELGWLTPEQLG 581

Query: 1698 ELSAEEATELIFKPGFSTAGQVSELAGRGIGMDVVRAQIAALGGRIETHSTPGQGTTFKL 1757
             +   +  + +F+PGFSTA +VS L+GRG+G+D+V+  I +L G +   +  GQG+ F +
Sbjct: 582  TIGEAQMLDFLFQPGFSTAAEVSNLSGRGLGLDIVKQMIESLRGTLTVETKLGQGSRFLI 641

Query: 1758 VLPLTTAVTHVVMLRAGEVSIGVPSNLVELVQRVSGTDLDAAYLHNSHPFGSEQVPFYWA 1817
             +PL+  +  ++++R  +  +  PS   E V R+   D         +P  + +V   W 
Sbjct: 642  RIPLSLNIVPLLLVRYQQRLLAFPS---ESVLRILPLD--------DYPIKNGRVE--WQ 688

Query: 1818 GALLQASTRSE------------HAAAKNNTLVVVRSAAQRVALHVDEVLGNQEVVVKNL 1865
              +++A    E                 +   ++V    +   L V++++  + +VVK L
Sbjct: 689  SQIMEACPLDEVLPQIYPQGFSPSPGLPHKVGLMVNLGDRSALLTVEQIVDERTLVVKAL 748

Query: 1866 GPQLARLPGLAGISVLASGAVALIYNPVALAAVHGEQARERQAAALAAAPARAAAAEAEQ 1925
                     +AG +VL +G V  +  P   A +   +    Q AA +A            
Sbjct: 749  DAITPIPSYVAGCTVLGTGEVVPVLIPNNFAVLWRTEPTLPQDAAGSAGGQTT------- 801

Query: 1926 GVPQEPVVLAPVTPQIPLVLVVDDSITVRRVTQRLLQREGYRVSLAADGLQALERLQQER 1985
                              +LV+DDS+TVRR  QR+L    +R+    DG +A + L ++ 
Sbjct: 802  ------------------ILVIDDSVTVRRTLQRVL-GGSFRLIQCRDGKEAWDLLNRQN 842

Query: 1986 PAV--VLSDIEMPRMDGFDLARNIRADSALAELPIIMITSRIAEKHRDYARTLGVNHYLG 2043
              +   L DIEMP MDGF L + +RA      L ++M+TSR    HR+ A+ LG + YL 
Sbjct: 843  QGIDLALCDIEMPNMDGFSLLQLVRAHRVWHSLTVVMLTSRENPLHRNRAKALGADGYLT 902

Query: 2044 KPYSEEELLRLVRAYTSEPA 2063
            KP+   +LL  +  + +E A
Sbjct: 903  KPFQPNQLLSTIDQFLAESA 922



 Score = 31.2 bits (69), Expect = 7e-04
 Identities = 28/88 (31%), Positives = 37/88 (42%), Gaps = 7/88 (7%)

Query: 1247 DAIDLADAVDVDLFPIFEEEAAELLPQLG---ESLRQWAHHPDDSAPRAAVL----RTLH 1299
            DA  LA           EE+A E L QL    +SL +      DS  R  ++    R  H
Sbjct: 3    DAATLAAITAEARQAFLEEDAPECLAQLTVGFQSLERVLGPAGDSQQRQKLIQDMGRAAH 62

Query: 1300 TLKGSARLAGAMRLGERAHRMESEIELL 1327
            +LKG A ++    L    HR+E   E L
Sbjct: 63   SLKGGAGMSALTPLQTLCHRLEDLFEAL 90