Pairwise Alignments
Query, 2069 a.a., Signal transduction histidine kinase CheA from Variovorax sp. SCN45
Subject, 928 a.a., CheA signal transduction histidine kinase from Synechococcus elongatus PCC 7942
Score = 304 bits (779), Expect = 3e-86
Identities = 280/1004 (27%), Positives = 456/1004 (45%), Gaps = 144/1004 (14%)
Query: 1096 LYNVYLNEADEWSRQLATDVG--EWALESHERLPDSTVALAHSLAGSSATVGFHSLSGMA 1153
L +++L E E + L +G E L + D++ A AHSL G +A + F + +A
Sbjct: 9 LRSLFLRETRENLQLLTQMIGQMEAGLPDAKTFADASRA-AHSLKGGAALLKFETFRQLA 67
Query: 1154 RLFESALQHLQMQGSGSREQGM--------VLVAAADELRRLLHQFAVGFLRDPAEGT-- 1203
E+ L L E + +L+ A D + + + AV P EG
Sbjct: 68 AGLETCLSLLSEAELPDYEVSLPLFQRAAALLITATDRIEAGVEEQAVV----PEEGNPL 123
Query: 1204 ---LQALRDIANSPMPTEIAMRAEARPLQQVVSSDSIADVALDDSEDAIDLADAVDVDLF 1260
LQ L+++ + + + P Q V+S ++ D+ D E + +
Sbjct: 124 IEQLQVLQEMLQAAV--------QVPPDQSAVTS-TLEDLLTQDFETVL-------LPPT 167
Query: 1261 PIFEEEAAELLPQLGESLRQWAHHPDDSAPRAAVLRTLHTLKGSARLAGAMRLGERAHRM 1320
P E+ +LL L E+ A D A L + +
Sbjct: 168 PDLEQTLDQLLGDLEETPSPIAGQGSDGDRPA--------------------LEDLNFDL 207
Query: 1321 ESEIELLGSQGAERADIEKLLGRLDALQATFDALRAADDATQVELAQLVASASASAPAAQ 1380
E IE + +E +I+ ++ ++ AL+A A D TQ Q ++ +
Sbjct: 208 EDWIEA-SEEESETVEID-IVAQVKALEA------AIADLTQHPHEQPLSLGIKDDILSA 259
Query: 1381 LVQVAPEAGVPANDESAAPVAGDEDGETADDIAAAAPATASALQPRPAPALLAPLRAVSS 1440
++Q AP V E A ++G+T V
Sbjct: 260 VIQAAPRLPVALTLEPVAKARTQDNGKTP---------------------------VVFE 292
Query: 1441 QAVRIRTQLLDRLVAQTGEVIITRSRLEAELGQLRGSLADLT------GNL-DRLRQ--- 1490
Q +R+ + LD L GE++++R+ LE++ LR +L +L G+L +R+R+
Sbjct: 293 QTLRVPVRQLDNLSNLVGEIVVSRNTLESDQSHLRETLENLMLQVHQLGDLGERMRELYE 352
Query: 1491 -QLRDIEVQAESQMQSRLAQAKDSQQS------FDPLEFDRFTRVQELTRMMAESVNDVA 1543
L + + A Q+ A + S FD LE DRF+ +++ M E + +
Sbjct: 353 RSLLETALAARRQLVGSSTAAGSAGASTFPTEQFDDLELDRFSGFHSISQEMMELLVRLR 412
Query: 1544 TVQRTLQKTVQATEDDLSVQARQ-TRELQRGLLRTRMVEFEGISDRLYRVVRQASKDTGK 1602
+ V D L+ +Q T +LQ L +TRMV F ++D+L R VR+ S+ GK
Sbjct: 413 EAASDIDFMVNEPFDQLTRNFQQITLQLQSELNQTRMVPFSDLTDQLPRAVREISRRCGK 472
Query: 1603 QVRLDIVGGSIEMDRGVLDRMTPAFEHLLRNCVAHGIEDAAAREKAGKDASGLIVIDLHH 1662
RL+I G I +D+ +L ++ HL+ N ++HGIE A R+ K A G +V+
Sbjct: 473 GARLEIEGKDILIDKMILQKLQAPMTHLINNALSHGIETAEIRQYRNKSAEGTLVVRASL 532
Query: 1663 EGNDVSVSFRDDGAGLDRKRIAERARVLGLIGADQE--LSAEEATELIFKPGFSTAGQVS 1720
+GN ++ DDGAG+D +++ +A GLI ++ + E EL+F+PGFST Q
Sbjct: 533 QGNRTLITVTDDGAGIDAEQVKLKALARGLITPEEAAGMRVREIYELLFRPGFSTRDQAD 592
Query: 1721 ELAGRGIGMDVVRAQIAALGGRIETHSTPGQGTTFKLVLPLTTAVTHVVMLRAGEVSIGV 1780
ELAGRG+G+DVVR + + G I S G+GTTF LPLT ++T + +
Sbjct: 593 ELAGRGVGLDVVRRALHEIQGEIVVDSELGKGTTFTFRLPLTLSITKALTCLHERARLAF 652
Query: 1781 PSNLVE----LVQRVSGTDLDAAYLHNSHPFGSEQVPFYWAGALLQASTRSEHAAAKNN- 1835
P + VE + Q+ D + H + +P + +LL + N+
Sbjct: 653 PMDSVEEMLDIPQQRLAMDPQGQLRLDWH---NLSLPVFPLSSLLDFHLPFGRSRYYNSL 709
Query: 1836 ------TLVVVRSAAQRVALHVDEVLGNQEVVVKNLGPQLARLPGLAGISVLASGAVALI 1889
++VV+R+ + +A+ D++ G +E+V+K + +A+ G+ GI+V + G V I
Sbjct: 710 GDDGVVSIVVLRNDNEYLAVQTDQIEGEREIVIKQIEGPIAKPLGILGITVRSDGQVMPI 769
Query: 1890 YNPVALAAVHGEQARERQAAALAAAPARAAAAEAEQGVPQEPVVLAPVTPQIPLVLVVDD 1949
+ + L + + R+RQ AP +A E T P+VL+VDD
Sbjct: 770 VDVLELFDIAYGRVRQRQ-----VAPVAPSAGETR-------------TNTEPMVLIVDD 811
Query: 1950 SITVRRVTQRLLQREGYRVSLAADGLQALERLQQERPA-VVLSDIEMPRMDGFDLARNIR 2008
SITVR + ++ GY V A +G +ALE+L P +V DIEMP+M+G +L ++
Sbjct: 812 SITVRELLSMTFKKAGYVVEQARNGQEALEKLYSGLPCDLVFCDIEMPKMNGLELLERLQ 871
Query: 2009 ADSALAELPIIMITSRIAEKHRDYARTLGVNHYLGKPYSEEELL 2052
AD L LP+ M+TSR A++HR A LG Y KPY EE+LL
Sbjct: 872 ADPKLRSLPVAMLTSRGADRHRQIAAHLGARAYFTKPYLEEQLL 915
Score = 37.4 bits (85), Expect = 1e-05
Identities = 80/363 (22%), Positives = 131/363 (36%), Gaps = 37/363 (10%)
Query: 1251 LADAVDVDLFPIFEEEAAELLPQLGESLRQWAHHPDDSAPRAAVLRTLHTLKGSARLAGA 1310
++ D L +F E E L L + + Q D+ A R H+LKG A L
Sbjct: 1 MSSTSDNVLRSLFLRETRENLQLLTQMIGQMEAGLPDAKTFADASRAAHSLKGGAALLKF 60
Query: 1311 MRLGERAHRMESEIELLGSQGAERADIEKLLGRLDALQATFDALRAADDATQVELAQLVA 1370
+ A +E+ + LL AE D E L A +A E A +
Sbjct: 61 ETFRQLAAGLETCLSLLSE--AELPDYEVSLPLFQRAAALLITATDRIEAGVEEQAVVPE 118
Query: 1371 SASASAPAAQLVQVAPEAGVPANDESAAPVAGDEDGETADDIAAAAPATASA-------- 1422
+ Q++Q +A V + +A + ED T D P T
Sbjct: 119 EGNPLIEQLQVLQEMLQAAVQVPPDQSAVTSTLEDLLTQDFETVLLPPTPDLEQTLDQLL 178
Query: 1423 --LQPRPAPALLAPLRAVSSQAVRIRTQLLDRLVAQTGEVIITRSRLEAELGQLRGSLAD 1480
L+ P+P + L D + A E + A++ L ++AD
Sbjct: 179 GDLEETPSPIAGQGSDGDRPALEDLNFDLEDWIEASEEESETVEIDIVAQVKALEAAIAD 238
Query: 1481 LTGNLDR--LRQQLRDIEVQAESQMQSRL---------AQAKDSQQSFDPLEFDRFTRV- 1528
LT + L ++D + A Q RL A+A+ P+ F++ RV
Sbjct: 239 LTQHPHEQPLSLGIKDDILSAVIQAAPRLPVALTLEPVAKARTQDNGKTPVVFEQTLRVP 298
Query: 1529 ----QELTRMMAESVNDVATVQRTLQKTVQATEDDLSVQARQTREL--------QRGLLR 1576
L+ ++ E V T++ Q ++ T ++L +Q Q +L +R LL
Sbjct: 299 VRQLDNLSNLVGEIVVSRNTLESD-QSHLRETLENLMLQVHQLGDLGERMRELYERSLLE 357
Query: 1577 TRM 1579
T +
Sbjct: 358 TAL 360
Score = 35.8 bits (81), Expect = 3e-05
Identities = 46/197 (23%), Positives = 74/197 (37%), Gaps = 21/197 (10%)
Query: 658 VTELEEDDLQNIFLDEAREVVQNGLEAIAELASYPDDTEELTILRRAFHTLKGSSRMVGL 717
++ ++ L+++FL E RE +Q + I ++ + D + RA H+LKG + ++
Sbjct: 1 MSSTSDNVLRSLFLRETRENLQLLTQMIGQMEAGLPDAKTFADASRAAHSLKGGAALLKF 60
Query: 718 TEFGDAAWSLEQVLN----TWLADQRAATP-------ELLSGTERTLREFSEWVEAIAAG 766
F A LE L+ L D + P L++ T+R E G
Sbjct: 61 ETFRQLAAGLETCLSLLSEAELPDYEVSLPLFQRAAALLITATDRIEAGVEEQAVVPEEG 120
Query: 767 QPHSWQAASFSRVANALLAGEPVPPPVRVADAEALAVAARHIAAE--TPVAAPAVAPLPM 824
P Q + L A VPP D A+ + + V P L
Sbjct: 121 NPLIEQLQVLQEM---LQAAVQVPP-----DQSAVTSTLEDLLTQDFETVLLPPTPDLEQ 172
Query: 825 PALPDLPDLSLTPEPVS 841
L DL TP P++
Sbjct: 173 TLDQLLGDLEETPSPIA 189