Pairwise Alignments

Query, 2069 a.a., Signal transduction histidine kinase CheA from Variovorax sp. SCN45

Subject, 952 a.a., CheA signal transduction histidine kinase from Synechococcus elongatus PCC 7942

 Score =  307 bits (786), Expect = 5e-87
 Identities = 258/988 (26%), Positives = 449/988 (45%), Gaps = 86/988 (8%)

Query: 1100 YLNEADEWSRQLATDVGEWALESHERLP-DSTVALAHSLAGSSATVGFHSLSGMARLFES 1158
            +L EA+E+   +  ++ + +  S  R   D  +  AHS+ G +A +GF++LS +A   E 
Sbjct: 12   FLEEAEEYLGTIEKELVDLSQASDRRSQVDLILRAAHSIKGGAAMMGFNTLSELAHQLED 71

Query: 1159 ALQHLQMQGSGSREQGMVLVAAADELRRLLHQFAVGFLRDPAEGTLQALRDIANSPMPTE 1218
              + ++   +  +     L+   D L ++L     G   DP+   L++         P  
Sbjct: 72   FFKVMRSGKNFDQSLERQLLQGVDRLHQVLQVNRQG--TDPSPQWLES------QVQPLF 123

Query: 1219 IAMRAEARPLQQVVSSDSIADVALDDSEDAIDLADAVDVDLFPIFEEEAAELLPQLGESL 1278
              +R      +Q       AD+A+   E   D+          +FE E    L +L ES+
Sbjct: 124  AVLR------EQFGDPQPDADLAMLSEEAGDDMRSL-------LFESEVEGCLQRL-ESV 169

Query: 1279 RQWAHHPDDSAPRAAVLRTLHTLKGSARLAGAMRLGERAHRMESEIELLGSQGAE-RADI 1337
             Q   HP      A V + L      A L   + L + +    S  ELL  Q  + RA  
Sbjct: 170  LQTPEHPCLLEEFAIVAQEL------AGLGQMLELSQFSQFCTSIAELLEQQPTDLRATA 223

Query: 1338 EKLLGRLDALQATFDALRAADDATQVELAQLVASASASAPAAQLVQVAPEAGVPANDESA 1397
             K+L  L   QA     +     +Q                + L +  P+     +    
Sbjct: 224  TKILKDLRHCQALVLTQQINALPSQFVAQDQSPEGITLEANSGLAETFPQTKEVIHQNQI 283

Query: 1398 APVAGDEDGETADDIAAA-----APATASALQPRPAPALLAPLRAVSSQA--VRIRTQLL 1450
                  E+ +++  +A A      P T +     P P     L +  +QA  VR+  Q L
Sbjct: 284  TATRNSENIQSSLTVAEARQLDFTPETITTQTLHP-PINATDLTSEINQARTVRVGIQQL 342

Query: 1451 DRLVAQTGEVIITRSRLEAELGQLRGSLADLTGNLDRLRQQLRDIEVQAESQMQSRLAQA 1510
            + L    GE+ I R+ L  +L ++R  L  L   + RL Q   ++    +    +  A +
Sbjct: 343  EDLSELFGELNIERNGLSLQLKRMRQLLQTLKTKVRRLEQSSFELRSTTDRAATATTAFS 402

Query: 1511 ------KDSQQSFDPLEFDRFTRVQELTRMMAESVNDVATVQRTLQKTVQATEDDLSVQA 1564
                      Q+FD LEFDR++ +  +++ + E++  +  +   ++  ++ TE       
Sbjct: 403  LVGSGGSSWHQNFDILEFDRYSPLHLVSQDVMETIVQIQEITSDIETNLEETEQTEQSLR 462

Query: 1565 RQTRELQRGLLRTRMVEFEGISDRLYRVVRQASKDTGKQVRLDIVGGSIEMDRGVLDRMT 1624
            R  +++Q  L + RM  F  + +R  R++RQ  ++ GK VRL I G +  +DR +L+ + 
Sbjct: 463  RTAKQMQGRLTQVRMRPFADLVNRYPRMIRQLGQEYGKDVRLIINGENTLVDRAILELLA 522

Query: 1625 PAFEHLLRNCVAHGIEDAAAREKAGKDASGLIVIDLHHEGNDVSVSFRDDGAGLDRKRIA 1684
                HL+RN   HG+E    R+   K  +  I +   + GN   ++ RDDG G+D ++I 
Sbjct: 523  DPLLHLVRNAFDHGVESPQLRQSRDKSPTATIEVSAAYRGNQTVITIRDDGCGVDLQKIR 582

Query: 1685 ERARVLGLIGADQELSAE-EATELIFKPGFSTAGQVSELAGRGIGMDVVRAQIAALGGRI 1743
            +RA+ +GL  +  E +++ E  +LIF+PGF+TA QV+EL+GRG+GMDVVR  +  + G I
Sbjct: 583  QRAQRMGLDQSSLEAASDRELLDLIFEPGFTTAEQVTELSGRGVGMDVVRTNLQQIRGDI 642

Query: 1744 ETHSTPGQGTTFKLVLPLTTAVTHVVMLRAGEVSIGVPSNLVELVQRVSGTDLDAAYLHN 1803
            +  + P QGTTF + +P + +V  V+++    + + +P++++E +      +L+ +++ N
Sbjct: 643  QIETKPNQGTTFTITVPFSLSVARVLLIEVSNILVAIPTDVIEEI-----IELNPSWILN 697

Query: 1804 SH-----PFGSEQVPFYWAGALLQAS------TRSEHAAAKNNTLVVVRSAAQRVALHVD 1852
            S            VP        Q S      +          T+++V      V + VD
Sbjct: 698  SAGQTVLNLDEILVPLLQLDQWFQFSRPCPPISLDGVPTINQPTVLLVNQGNSFVGIQVD 757

Query: 1853 EVLGNQEVVVKNLGPQLARLPGLAGISVLASGAVALIYNPVALAAVHGEQARERQAAALA 1912
               G QEV ++ +   +   PG +  ++L  G +  + +  +L           Q    +
Sbjct: 758  RYWGEQEVTIRQVNSTIPLPPGFSSCTILGDGRIVPLVDTFSLL----------QWIQNS 807

Query: 1913 AAPARAAAAEAEQGVPQEPVVLAPVTPQIP---LVLVVDDSITVRRVTQRLLQREGYRVS 1969
              P+R +              + P T Q+P    +L++DDSI VRR    +L++ GYRV 
Sbjct: 808  NVPSRLSLK-----------AIQPATYQLPSQKSILIIDDSINVRRFLANILEKAGYRVE 856

Query: 1970 LAADGLQALERLQQE-RPAVVLSDIEMPRMDGFDLARNIRADSALAELPIIMITSRIAEK 2028
             A DG +A+++L+   +    + D+EMPR+DG+     ++   A A LPI M+TSR  +K
Sbjct: 857  QAKDGQEAIDKLKDGLKVEAAICDVEMPRLDGYGFLTQVKNIVAGANLPIAMLTSRSGDK 916

Query: 2029 HRDYARTLGVNHYLGKPYSEEELLRLVR 2056
            HR  A  LG   Y  KP+ E ELL+ ++
Sbjct: 917  HRRLALNLGAAAYFTKPFREPELLQTLQ 944



 Score = 38.5 bits (88), Expect = 5e-06
 Identities = 22/85 (25%), Positives = 44/85 (51%), Gaps = 3/85 (3%)

Query: 670 FLDEAREVVQNGLEAIAELASYPDDTEELTILRRAFHTLKGSSRMVGLTEFGDAAWSLE- 728
           FL+EA E +    + + +L+   D   ++ ++ RA H++KG + M+G     + A  LE 
Sbjct: 12  FLEEAEEYLGTIEKELVDLSQASDRRSQVDLILRAAHSIKGGAAMMGFNTLSELAHQLED 71

Query: 729 --QVLNTWLADQRAATPELLSGTER 751
             +V+ +     ++   +LL G +R
Sbjct: 72  FFKVMRSGKNFDQSLERQLLQGVDR 96