Pairwise Alignments

Query, 2069 a.a., Signal transduction histidine kinase CheA from Variovorax sp. SCN45

Subject, 758 a.a., chemotaxis protein (sensory transduction histidine kinase) from Sinorhizobium meliloti 1021

 Score =  206 bits (525), Expect = 8e-57
 Identities = 138/429 (32%), Positives = 217/429 (50%), Gaps = 25/429 (5%)

Query: 1498 QAESQMQSRLAQAKDSQQSFDPLEFDRFTRVQELTRMMAESVNDVATVQRTLQKTVQATE 1557
            Q+ S  Q+   QA  +      ++ DR  R+  L   +   +N     Q  ++     T 
Sbjct: 341  QSASAAQAAAQQAASAATPTIRVDLDRVDRLINLVGELV--INQAMLSQSVIENDTNGTS 398

Query: 1558 D---DLSVQARQTRELQRGLLRTRMVEFEGISDRLYRVVRQASKDTGKQVRLDIVGGSIE 1614
                 L    + TRE+Q  ++  R    + +  R+ R+VR+ +  TGK VRL   G + E
Sbjct: 399  SINMGLEELQQLTREIQDSVMAIRAQPVKPVFQRMSRIVREIADMTGKSVRLITEGENTE 458

Query: 1615 MDRGVLDRMTPAFEHLLRNCVAHGIEDAAAREKAGKDASGLIVIDLHHEGNDVSVSFRDD 1674
            +D+ V+D++     H++RN V HG+E    R  AGK+  G + +   H    + +   DD
Sbjct: 459  VDKTVIDKLAEPLTHMIRNAVDHGLETPEKRVAAGKNPEGTVRLTAKHRSGRIVIELADD 518

Query: 1675 GAGLDRKRIAERARVLGLIGADQELSAEEATELIFKPGFSTAGQVSELAGRGIGMDVVRA 1734
            GAG++R+++ ++A    LI AD  LS EE   LIF  GFSTA ++S+++GRG+GMDVV+ 
Sbjct: 519  GAGINREKVRQKAIDNDLIAADANLSDEEVDNLIFHAGFSTADKISDISGRGVGMDVVKR 578

Query: 1735 QIAALGGRIETHSTPGQGTTFKLVLPLTTAVTHVVMLRAGEVSIGVP-SNLVELVQRVSG 1793
             I ALGGRI   S PGQG+ F + LPLT AV   +++     ++ VP + +VE +Q    
Sbjct: 579  SIQALGGRINISSKPGQGSIFTMSLPLTLAVLDGMVVTVANQTLVVPLTAIVETLQP--- 635

Query: 1794 TDLDAAYLHNSHPFGSEQ---------VPFYWAGALLQASTRSEHAAAKNNTLVVVRSAA 1844
               +A+ +H+   FGS Q          P    G +L       +       LV      
Sbjct: 636  ---EASAIHS---FGSSQRLISIRDSFCPLVDVGRILNFRGAQANPVEGVALLVESEGGG 689

Query: 1845 QRVALHVDEVLGNQEVVVKNLGPQLARLPGLAGISVLASGAVALIYNPVALAAVHGEQAR 1904
            QR AL VD + G ++VV+K+L      +PG+A  ++L  G VALI +  A+ A    Q+ 
Sbjct: 690  QR-ALMVDAIQGQRQVVIKSLEANYTHVPGIAAATILGDGRVALILDVDAIVAASRGQSL 748

Query: 1905 ERQAAALAA 1913
            + + +  AA
Sbjct: 749  KPEMSLAAA 757



 Score = 46.2 bits (108), Expect = 2e-08
 Identities = 51/165 (30%), Positives = 73/165 (44%), Gaps = 16/165 (9%)

Query: 1262 IFEEEAAELLPQLGESLRQWAHHPDDSAPRAAVLRTLHTLKGSARLAGAMRLGERAHRME 1321
            IF +E  E L +L   L +      D     AV R +H++KG A   G   L   AH  E
Sbjct: 9    IFFQECEEQLAELESGLLKLNDGDRDPETVNAVFRAVHSIKGGAGAFGLDDLVSFAHVFE 68

Query: 1322 SEIELLGSQGAE-RADIEKLLGR-LDALQATFDALR---AADDATQVEL---------AQ 1367
            + ++ + S   E   D+ K++ R  D L    +A R     D+A   +L          +
Sbjct: 69   TTLDCVRSNRLEPNQDVLKVMLRSADVLADLTNAARDGGGVDEARSRQLIKELEALANGE 128

Query: 1368 LVASASASAPAAQLVQVAPEAGVPANDESAAPVA-GDEDGETADD 1411
            L  +A+ SAP      VAP A V  N+E   PVA   +D ET D+
Sbjct: 129  LPQAAAESAPKTTPAGVAPAAPV-VNEEGFQPVAFSFDDFETGDE 172



 Score = 32.3 bits (72), Expect = 3e-04
 Identities = 21/49 (42%), Positives = 22/49 (44%), Gaps = 2/49 (4%)

Query: 914 QARAEPEPVVPPAAEPEVPAEPVASVETESPAATSLPDFVWEPEPEPEP 962
           QA AE  P   PA     PA PV + E   P A S  DF    EP  EP
Sbjct: 131 QAAAESAPKTTPAGV--APAAPVVNEEGFQPVAFSFDDFETGDEPTIEP 177



 Score = 30.0 bits (66), Expect = 0.001
 Identities = 17/72 (23%), Positives = 33/72 (45%)

Query: 661 LEEDDLQNIFLDEAREVVQNGLEAIAELASYPDDTEELTILRRAFHTLKGSSRMVGLTEF 720
           ++ ++++ IF  E  E +      + +L     D E +  + RA H++KG +   GL + 
Sbjct: 1   MDMNEIKEIFFQECEEQLAELESGLLKLNDGDRDPETVNAVFRAVHSIKGGAGAFGLDDL 60

Query: 721 GDAAWSLEQVLN 732
              A   E  L+
Sbjct: 61  VSFAHVFETTLD 72