Pairwise Alignments
Query, 2069 a.a., Signal transduction histidine kinase CheA from Variovorax sp. SCN45
Subject, 920 a.a., chemotaxis protein CheA from Methanococcus maripaludis S2
Score = 189 bits (479), Expect = 2e-51
Identities = 127/401 (31%), Positives = 215/401 (53%), Gaps = 21/401 (5%)
Query: 1497 VQAESQMQSRLAQAKDSQQSFDPLEFDRFTRVQELTRMMAESVNDVATVQRTLQK-TVQA 1555
V A S+ Q+ + +K SQ +E ++ +L ++ E V + A + K ++
Sbjct: 527 VDATSKKQAENSSSKKSQTVRVNIE-----KLDKLMNLVGEVVINRANFTQIATKYDLKE 581
Query: 1556 TEDDLSVQARQTRELQRGLLRTRMVEFEGISDRLYRVVRQASKDTGKQVRLDIVGGSIEM 1615
+ + ELQ ++ RM+ + +R R VR +K K++ +I G IE+
Sbjct: 582 LHNAVGRLNMLATELQEEVMGMRMIPVAFVFNRFPRTVRDTAKALDKEIDFEIEGSDIEL 641
Query: 1616 DRGVLDRMTPAFEHLLRNCVAHGIEDAAAREKAGKDASGLIVIDLHHEGNDVSVSFRDDG 1675
DR VLD + HL+RN + HGIE A R K GK G++ + + + V++ RDDG
Sbjct: 642 DRTVLDELAEPLTHLIRNSLDHGIEHADERIKLGKPEKGILKLIATRQRDRVNIIIRDDG 701
Query: 1676 AGLDRKRIAERARVLGLIGAD--QELSAEEATELIFKPGFSTAGQVSELAGRGIGMDVVR 1733
G+D + + ++A GL + ++L+ EA +IF PGFSTA VS+++GRG+GMDVVR
Sbjct: 702 KGIDPEAMRKKAFEKGLYSKEEAEKLTDNEAVNVIFHPGFSTAEVVSDVSGRGVGMDVVR 761
Query: 1734 AQIAALGGRIETHSTPGQGTTFKLVLPLTTAVTHVVMLRAGEVSIGVP-SNLVELV---- 1788
++I +LGG + +S G+GT L LPLT A+ +++R E +P +++++++
Sbjct: 762 SKIESLGGSVTVNSEVGKGTEITLHLPLTMAIIQTLLIRLNEHIYALPLTSVLDVISVEK 821
Query: 1789 QRVSGTDLDAAYLHNSHPFGSEQVPFYWAGALLQASTRSEHAAAKNNTLVVVRSAAQRVA 1848
+++ + A ++ +H +P W L A S + + + +VVV +V
Sbjct: 822 EQIKNLEGQEAIIYRNH-----ILPVIW---LKDALNTSGFSDSDDLYVVVVEKNKGKVG 873
Query: 1849 LHVDEVLGNQEVVVKNLGPQLARLPGLAGISVLASGAVALI 1889
+ +DEV+G E+VVK L L + GLAG ++L G VALI
Sbjct: 874 MILDEVIGRDEIVVKPLTGILKNINGLAGATILGDGRVALI 914
Score = 50.4 bits (119), Expect = 1e-09
Identities = 82/376 (21%), Positives = 156/376 (41%), Gaps = 25/376 (6%)
Query: 1262 IFEEEAAELLPQLGESLRQWAHHPDDSAPRA-AVLRTLHTLKGSARLAGAMRLGERAHRM 1320
+F EA E L L +++ + + P+DS + R+ HTLKGSAR G + H M
Sbjct: 10 LFMTEAEEHLQSLNQNMVELENCPEDSERIINMIFRSAHTLKGSARTLGFEHISSLTHHM 69
Query: 1321 ESEIELL--GSQGAERADIEKLLGRLDALQATFDALRAADDATQVELAQLVASASASAPA 1378
E ++ + G ++ L LDAL+ + +D T V++ LV +
Sbjct: 70 EDILDYIRDGKIKVNPEIVDLLFKCLDALETMVSEVSDGEDTTSVDVDSLVEVIKSVKEK 129
Query: 1379 AQLVQVAPEAGVPANDESAAPVAGDEDGETADDIAAAAPATASALQPRPAPALLAPLRAV 1438
+ + E + +D + E+ +T ++I++ + + + + + +
Sbjct: 130 YLSGENSKEDSLDYSDPNEVAKKQVEE-KTVNNISSNSGSIHLVNE-----SSIILIEGQ 183
Query: 1439 SSQAVRIRTQLLDRLVAQTGEVIITRSRLEAELGQLR-GSLADLTGNLDRLRQQLRDIEV 1497
S+ +V + + LD ++ Q E + S L L L G L D N+D L + + V
Sbjct: 184 SNNSVVEKPENLDSVLNQMHE---SASALLTILDALEYGELKDTVKNIDELSNAMLNETV 240
Query: 1498 QAESQMQSRLAQAKDSQQSFDPLEFDRFTRVQELTRMMAESVNDVATVQRTLQKTV-QAT 1556
S L A + Q + V+ +R + + TL +TV ++
Sbjct: 241 AITENSLSVLKSALSTMQQIAKV-------VETGSRAKCDYSELNEKISLTLSETVGESV 293
Query: 1557 EDDLSVQARQTRELQRGLLRTRMVEFEGISDRLYRVVRQASKD-TGKQVRLDIVGGSIEM 1615
ED + +L+ + ++ + ++Y V + +D K VRL +V ++
Sbjct: 294 EDKEIILDHTIFDLEE--VSEELISEINENKKIYHVKSKVVEDCLLKAVRLTMVLSKLK- 350
Query: 1616 DRGVLDRMTPAFEHLL 1631
+ G + PA E+LL
Sbjct: 351 EIGTIISSVPAEENLL 366
Score = 45.4 bits (106), Expect = 4e-08
Identities = 26/105 (24%), Positives = 53/105 (50%), Gaps = 1/105 (0%)
Query: 664 DDLQNIFLDEAREVVQNGLEAIAELASYPDDTEEL-TILRRAFHTLKGSSRMVGLTEFGD 722
+ + +F+ EA E +Q+ + + EL + P+D+E + ++ R+ HTLKGS+R +G
Sbjct: 5 EQYKELFMTEAEEHLQSLNQNMVELENCPEDSERIINMIFRSAHTLKGSARTLGFEHISS 64
Query: 723 AAWSLEQVLNTWLADQRAATPELLSGTERTLREFSEWVEAIAAGQ 767
+E +L+ + PE++ + L V ++ G+
Sbjct: 65 LTHHMEDILDYIRDGKIKVNPEIVDLLFKCLDALETMVSEVSDGE 109
Score = 33.5 bits (75), Expect = 1e-04
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 1099 VYLNEADEWSRQLATDVGEW--ALESHERLPDSTVALAHSLAGSSATVGFHSLSGMARLF 1156
+++ EA+E + L ++ E E ER+ + AH+L GS+ T+GF +S +
Sbjct: 10 LFMTEAEEHLQSLNQNMVELENCPEDSERIINMIFRSAHTLKGSARTLGFEHISSLTHHM 69
Query: 1157 ESALQHLQ 1164
E L +++
Sbjct: 70 EDILDYIR 77