Pairwise Alignments

Query, 768 a.a., twitching motility protein PilJ from Variovorax sp. SCN45

Subject, 680 a.a., chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  412 bits (1058), Expect = e-119
 Identities = 271/689 (39%), Positives = 386/689 (56%), Gaps = 24/689 (3%)

Query: 84  TAGGRVGAAPAKQQRILAIMLAVVVLLLLLVAGSAILRAERL--AQQVAATGQALMQSQR 141
           T   R GA    Q  I+ + +A++V ++LL A  A L  +     Q +   G+  + SQR
Sbjct: 4   TDRSREGARSRTQ--IILLFVALIVFIMLLFANFAYLNTQSNYDKQYIGHAGELRVLSQR 61

Query: 142 LAKSISQALVGSASAFVEVKDSADDLSRRVQGLTNGDESLRLERVGNQYDEEMNKINPLV 201
           +AK+ ++A  G   AF  + D+ +D   R   L  GD +  L        +E+  +    
Sbjct: 62  IAKNATEAAAGKTQAFKLLADARNDFDVRWGYLRKGDPATGLPAAPELIRDELRTVQRDW 121

Query: 202 TRADTSAKAVLAQRQI---LTQVGAALRDINQQSSTLLEMTETVASLKMQQNATLPEISA 258
                S   +LA  Q    L QV A L +   Q     E  + V SL +Q  A   ++  
Sbjct: 122 EGLRKSTDVILASEQTVLSLHQVAATLAETIPQLQA--EYEKVVESL-LQSRAPAAQVVV 178

Query: 259 AGQLVMLTQRIGKSTNEFFTVEGVNPDAVFLLGKDLNTFQETTRGLLDGNAQQRFPGSKD 318
           A +  +L +RI  S N     +     A    G+D + F     G+L+GNA  R    +D
Sbjct: 179 AQRQALLAERILGSVNTVLAGDETAVQAADAFGRDASQFGRVLNGMLEGNATLRISQVED 238

Query: 319 PQTRQQLEAILKTYEQMRTQASAILGNLQGLVAAREAQASILTDSEPLRKSLGDLQDKLS 378
              R +L  I + +E +      IL     L   REA  +I   S+ L      L + L 
Sbjct: 239 RDARARLAEIAELFEFVSGSVDEILETSPELYQVREASGNIFNTSQTLLDETSVLANSLE 298

Query: 379 ARTGLGAGTIVLLFVLSLAALALAGAIGFVQVREGRERAAVAERERLAAEQASEEAGRVN 438
                     V  +VL L ALA    IG V VRE         R+     Q SE      
Sbjct: 299 NLAKRRTVNTVGGYVLGLLALASIILIGLVMVRE-------TNRQLRETAQKSER----- 346

Query: 439 NANQAAILRLMNELQTVAEGDLTQEATVTEDITGAIADSVNYTVEELRLLVGNVQNTATR 498
             NQ AI+RL++E++ +A+GDLT  A+VTED TGAIADS+NY++++LR LV  +  TA +
Sbjct: 347 --NQTAIMRLLDEIENLADGDLTVTASVTEDFTGAIADSINYSIDQLRELVVTINLTAEQ 404

Query: 499 VAQTTSQVESTSTELLAASTEQLREIRETGQSVLTMAERINGVSSQAQESATVARQSLQA 558
           VA   ++ ++T+ +L AAS  Q  +I     ++  MA  I+ VS+ A ES+ VA +S+  
Sbjct: 405 VAAAVTETQATAMQLSAASEHQALQISAASTAINDMAASIDQVSTNASESSAVAERSVTI 464

Query: 559 ASSGLQAVQNAIGGMNSIRDQIQETSKRIKRLGESSQEIGEITELISDITEQTNVLALNA 618
           A+ G + VQN I GM++IR+QIQ+TSKRIKRLGESSQEIG+I  LI DI +QTN+LALNA
Sbjct: 465 ANKGNEVVQNTIHGMDNIREQIQDTSKRIKRLGESSQEIGDIVSLIDDIADQTNILALNA 524

Query: 619 AIQAASAGEAGRGFSVVAEEVQRLAERSADATRQISALVKAIQTDTQDAVGAMERSTQGV 678
           AIQA+ AG+AGRGF+VVA+EVQRLAERS+ AT+QI  LV+AIQ DT +AV +ME++T  V
Sbjct: 525 AIQASMAGDAGRGFAVVADEVQRLAERSSSATKQIETLVRAIQNDTNEAVISMEQTTSEV 584

Query: 679 VEGAKLSDNAGTALSEIDRVSRRLADLIEQISQSASREADSANVVAANIQHIFAVTEQTG 738
           V GA+L+ +AG AL EI+ VSR LA+LIE I+ +A ++A+SA  ++  +  I   T QT 
Sbjct: 585 VRGARLAQDAGVALGEIEGVSRVLAELIESITDAAHQQAESAGQISQIMTVIQQTTSQTT 644

Query: 739 EGTRTTAQQVRELSQMAEELRRSVARFKI 767
            GT  TA+ +  L++MA E+RRSV+ F +
Sbjct: 645 SGTSATAESIGNLAKMASEMRRSVSGFAL 673