Pairwise Alignments

Query, 768 a.a., twitching motility protein PilJ from Variovorax sp. SCN45

Subject, 1406 a.a., methyl-accepting chemotaxis sensory transducer with phytochrome sensor from Synechococcus elongatus PCC 7942

 Score =  224 bits (572), Expect = 2e-62
 Identities = 131/367 (35%), Positives = 222/367 (60%), Gaps = 2/367 (0%)

Query: 401  LAGAIGFVQVREGRERAAVAERERLAAEQASEEAGRVNNANQAAILRLMNELQTVAEGDL 460
            LA  IG    R    + A   R+R  AEQ ++E  +   A QA +++L+++++  + GDL
Sbjct: 1038 LATQIGLALARADFLQQAETARDR--AEQLAQEQQQRTEAIQAELIQLLSDVEDASRGDL 1095

Query: 461  TQEATVTEDITGAIADSVNYTVEELRLLVGNVQNTATRVAQTTSQVESTSTELLAASTEQ 520
            T  A ++      +AD  N  +E LR +V  V+ +  +V  +     ++   L A S  Q
Sbjct: 1096 TVRADISAGEISTVADIFNSLIESLRAVVVQVKASTQKVNTSLDSDANSMQRLAADSQSQ 1155

Query: 521  LREIRETGQSVLTMAERINGVSSQAQESATVARQSLQAASSGLQAVQNAIGGMNSIRDQI 580
              +I++T  +V  M++ I  VS+ A ++A VAR+S Q A S  Q +   +  +  +R+ +
Sbjct: 1156 AEKIKKTLNAVAEMSKSILDVSNTANQAAEVARKSSQTAISSGQTMDETVRSILHLRETV 1215

Query: 581  QETSKRIKRLGESSQEIGEITELISDITEQTNVLALNAAIQAASAGEAGRGFSVVAEEVQ 640
             ET+K++KRLGESSQ+I ++  LI+ I  QTN+LA+NA+I+AA AGE GRGF+VVAEEV 
Sbjct: 1216 AETAKKVKRLGESSQQISKVISLINQIALQTNLLAINASIEAARAGEEGRGFAVVAEEVG 1275

Query: 641  RLAERSADATRQISALVKAIQTDTQDAVGAMERSTQGVVEGAKLSDNAGTALSEIDRVSR 700
            +LA RSA+AT++I  +V+ IQ +T + V AME  T  VVEG +L +    +L EI +VS+
Sbjct: 1276 QLATRSANATKEIEQIVETIQQETNEVVTAMETGTSQVVEGTQLVEATKKSLEEIVQVSQ 1335

Query: 701  RLADLIEQISQSASREADSANVVAANIQHIFAVTEQTGEGTRTTAQQVRELSQMAEELRR 760
            ++  L++ ISQ+   ++ ++NVV   ++ +   +E+  + +R  +  ++    +A++L+ 
Sbjct: 1336 QIDQLVQAISQATVSQSQTSNVVTNLMEEMAGFSEEISDTSRHISASLQATVAVAQKLKS 1395

Query: 761  SVARFKI 767
            SV  F++
Sbjct: 1396 SVDTFRV 1402



 Score = 26.9 bits (58), Expect = 0.008
 Identities = 30/124 (24%), Positives = 51/124 (41%), Gaps = 21/124 (16%)

Query: 388 IVLLFVLSLAALALAGAIGFVQVREGRE-RAAVAERERLA--------AEQASEEAG--- 435
           + LL+   L+A+A+      +  R  R  +AA+A  E+L+        AE   +E     
Sbjct: 111 LTLLWGTGLSAVAVGIIAAALANRSSRRLQAAIAALEKLSQGDVNVAVAEDGDDEIAVLG 170

Query: 436 -RVNNANQ--------AAILRLMNELQTVAEGDLTQEATVTEDITGAIADSVNYTVEELR 486
             +N+A          A + R     +TV    L +E T+       + D +N  V+E R
Sbjct: 171 QEINHAASQIQTALATAEVSREQQRSETVRVNQLVREITLRLISQANVTDVLNVAVQEAR 230

Query: 487 LLVG 490
             +G
Sbjct: 231 AAIG 234