Pairwise Alignments

Query, 768 a.a., twitching motility protein PilJ from Variovorax sp. SCN45

Subject, 541 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  162 bits (410), Expect = 4e-44
 Identities = 105/335 (31%), Positives = 183/335 (54%), Gaps = 10/335 (2%)

Query: 437 VNNANQAAILRLMNELQTVAE-GDLTQEATV-TEDITGAIADSVNYTVEELRLLVGNVQN 494
           VN      +  +  +L+ + E  D+T   TV  +D  G IA  +N  V  L+ ++ N+  
Sbjct: 209 VNRGVMTPVTEIRQKLRQIREKSDMTVSFTVFRDDELGHIAKDLNGVVNHLKGILKNIAE 268

Query: 495 TATRVAQTTSQVESTSTELLAASTEQLREIRETGQSVLTMAERINGVSSQAQESATVARQ 554
            A+ +  +  ++   + +      +Q  E  +T  ++  M   +  V+  +  +A  AR 
Sbjct: 269 AASTLGDSADELNEFTRQANDRMFKQQSETEQTATAMNEMTAAVAEVAQSSNSAAESARN 328

Query: 555 SLQAASSGLQAVQNAIGGMNSIRDQIQETSKRIKRLGESSQEIGEITELISDITEQTNVL 614
           + ++A+ G   VQ +I  M+ +  QIQ T+  I  L   SQ IG + ++I  I EQTN+L
Sbjct: 329 ADESAARGNSIVQQSISSMSVLASQIQGTAAVIGELATESQNIGRVLDVIKSIAEQTNLL 388

Query: 615 ALNAAIQAASAGEAGRGFSVVAEEVQRLAERSADATRQISALVKAIQTDTQDAVGAMERS 674
           ALNAAI+AA AGE GRGF+VVA+EV+ LA+R++++TR+I ++++++Q   + AV +ME+ 
Sbjct: 389 ALNAAIEAARAGEQGRGFAVVADEVRTLAQRTSESTREIESMIESLQQGVKSAVNSMEQG 448

Query: 675 TQGVVEGAKLSDNAGTALSEIDRVSRRLADLIEQISQSASREADSANVVAANI-QHIFAV 733
              V    + ++ AG+AL +I        D I Q++   +  AD  + VA +I Q I A+
Sbjct: 449 IAQVDNANESTNAAGSALQDI----VASVDSITQLNTHIATAADEQSCVAESINQSIIAI 504

Query: 734 TEQTGEGTRTT---AQQVRELSQMAEELRRSVARF 765
           ++   E T+     ++ V +L+Q+A  +R  V  F
Sbjct: 505 SDIAQESTQAANDLSEAVHQLAQLAGHMRTQVGTF 539