Pairwise Alignments

Query, 353 a.a., tRNA-dihydrouridine synthase DusB from Variovorax sp. SCN45

Subject, 331 a.a., tRNA dihydrouridine synthase DusB from Vibrio cholerae E7946 ATCC 55056

 Score =  352 bits (904), Expect = e-102
 Identities = 182/324 (56%), Positives = 228/324 (70%), Gaps = 3/324 (0%)

Query: 3   LQIGTHTLENRLFVAPMAGVTDRPFRMLCRALGAGYAVSEMVTSRKELWGTLKTSRRANH 62
           L+IG + L+N L VAPMAGVTDRPFR LC   GAG AVSEM++    LW T K+  R  H
Sbjct: 10  LKIGNYQLKNNLIVAPMAGVTDRPFRELCLRYGAGMAVSEMMSCNPALWKTAKSQNRMVH 69

Query: 63  DGEPGPIAVQIAGTDADMMAEATVYNIERGAQIIDINMGCPAKKVCNKWAGSALMRDEPL 122
           +GE G  +VQIAG+D  +MAEA  +++E GAQIIDINMGCPAKKV  K AGSAL+R   +
Sbjct: 70  EGESGIRSVQIAGSDPQLMAEAAQFSVENGAQIIDINMGCPAKKVNKKLAGSALLRYPDV 129

Query: 123 ALEIVQAVVDAARPFNVPVTLKMRTGWSHDHRNAVKLARDFESAGVQMLTVHGRTREQGY 182
             +I++AVV+A    NVPVTLK RTGW  D++N + +A+  E  G+Q L +HGRTR   Y
Sbjct: 130 IEDILKAVVNAV---NVPVTLKTRTGWDTDNKNCLSIAQLAEDCGIQALALHGRTRACMY 186

Query: 183 KGHAEYDTIAAVKAAVRVPVVANGDIRSPEKARDVLAATGADAVMIGRAAQGRPWIFREI 242
           KG AEYD+I AVKAAV +PV+ANGDI SPEKAR VL  TGADA+MIGR AQGRPWIF+EI
Sbjct: 187 KGEAEYDSIKAVKAAVSIPVIANGDIDSPEKARYVLEYTGADALMIGRPAQGRPWIFQEI 246

Query: 243 AHFLETGTHRAPPLVAEVRRLLLDHLVEHYALYGDYSGVRTARKHIGWYVRTLPEGEAFR 302
            HFLE GT      ++EV+ ++L H+   +  YG+Y G R ARKH+ WY++   +  AFR
Sbjct: 247 QHFLEHGTTMPELPISEVKDIMLGHVTALHQFYGEYLGPRIARKHVSWYLQEHEQASAFR 306

Query: 303 ARMNTIEDCGEQLRAVGDYFDGLA 326
              N IE   +QL A+  YFD +A
Sbjct: 307 RTFNAIETADQQLDALEGYFDNVA 330