Pairwise Alignments

Query, 542 a.a., Ribose ABC transporter, ATP-binding protein RbsA (TC 3.A.1.2.1) from Variovorax sp. SCN45

Subject, 517 a.a., Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) from Pseudomonas fluorescens FW300-N2E2

 Score =  545 bits (1405), Expect = e-159
 Identities = 296/510 (58%), Positives = 358/510 (70%), Gaps = 10/510 (1%)

Query: 9   VLSLSTMGKDYAAPVLDDVSLVLNAGEVLALTGENGAGKSTLSKIVCGLVQPTRGQMLLD 68
           VL +S +GK YA PVL D++L L  GEVLALTGENGAGKSTLSKI+ GLV PT GQM   
Sbjct: 9   VLCVSGIGKTYAQPVLTDINLTLMRGEVLALTGENGAGKSTLSKIIGGLVTPTTGQMQFQ 68

Query: 69  GQPFAPGSRRDAERLGVRMVMQELGLVTTLSVAENLLLDRLPSKTGWIRRGKLNELAARQ 128
           GQ + PGSR  AE LGVRMVMQEL L+ TLSVAENL LD LP+  GWI R +L + A   
Sbjct: 69  GQDYRPGSRTQAEELGVRMVMQELNLLPTLSVAENLFLDNLPNHGGWISRKQLRKAAIEA 128

Query: 129 LAKIGMQNIDPATPVARLGIGQQQMVEIARNLQDDTRVLVLDEPTAMLTPRETSHLFEQI 188
           +A++G+  IDP T V  LGIG QQMVEIARNL  D  VL+LDEPTAMLT RE   LFEQI
Sbjct: 129 MAQVGLDAIDPDTLVGELGIGHQQMVEIARNLIGDCHVLILDEPTAMLTAREVEMLFEQI 188

Query: 189 ELLKARGVAIVYVSHRLEELQRIADRVAVLRDGRLVDVRAMAGVRESELVQRMVGRAVHE 248
             L+ARGV+I+Y+SHRLEEL R+A R+AVLRDG LV V  MA     +LV  MVGR + E
Sbjct: 189 TRLQARGVSIIYISHRLEELARVAQRIAVLRDGNLVCVEPMANYNSEQLVTLMVGRELGE 248

Query: 249 HEGRERRTAGPVLLSARGIGRAQVVRDVDIDLRAGEVMGLAGLVGSGRTELVRLLFGADR 308
           H     R  G   L+ +G+ R+  VRDV  ++R+GE+ G++GL+G+GRTEL+RL+FGAD 
Sbjct: 249 HIDLGPRQIGAPALTVKGLTRSDKVRDVSFEVRSGEIFGISGLIGAGRTELLRLIFGADT 308

Query: 309 ADRGEITLYENDQPVQQARKGWRSPMQAIRAGIGLVTEDRKSQGLLLTQSIRVNATLSDL 368
           AD G + L    Q V       RSP  A+  GI L+TEDRK +GLLLTQSI  N  L ++
Sbjct: 309 ADSGTVALGSPAQVV-----SIRSPADAVAHGIALITEDRKGEGLLLTQSIAANIALGNM 363

Query: 369 GAISRAGWLQRAKERGIAQKLVELLRIRSRSIEQPVATLSGGNQQKVVFARWLHRECKVL 428
             IS AG +    E  +AQ+ V+ +RIRS S  Q V+ LSGGNQQKVV  RWL R+C V+
Sbjct: 364 PEISSAGLVNGDAELALAQRQVDAMRIRSSSPTQLVSELSGGNQQKVVIGRWLERDCAVM 423

Query: 429 LLDEPTRGVDVGARADLYAELDRMTDAGKALLMVSSDLRELMAMCDRIGVMSAGRLVAVF 488
           L DEPTRG+DVGA+ D+YA L  +T  GKAL++VSSDLRELM +CDRIGV+SAGRL+  F
Sbjct: 424 LFDEPTRGIDVGAKFDIYALLGELTRQGKALVVVSSDLRELMLICDRIGVLSAGRLIDTF 483

Query: 489 ERGEWTEQSLLAAAFS-----DATGRAAAP 513
           ER  WT+  LLAAAF+     DA    AAP
Sbjct: 484 ERDSWTQDDLLAAAFAGYQKRDALLNEAAP 513