Pairwise Alignments

Query, 542 a.a., Ribose ABC transporter, ATP-binding protein RbsA (TC 3.A.1.2.1) from Variovorax sp. SCN45

Subject, 500 a.a., ribose import ATP-binding protein RbsA from Vibrio cholerae E7946 ATCC 55056

 Score =  325 bits (832), Expect = 3e-93
 Identities = 192/507 (37%), Positives = 297/507 (58%), Gaps = 11/507 (2%)

Query: 7   QPVLSLSTMGKDY-AAPVLDDVSLVLNAGEVLALTGENGAGKSTLSKIVCGLVQPTRGQM 65
           Q +L+LS + K +     LD  SL +  G V+AL GENGAGKSTL K++ G+     G +
Sbjct: 3   QAILALSQIEKAFPGVKALDKASLNVYPGRVMALMGENGAGKSTLMKVLTGIYSKDAGSI 62

Query: 66  LLDGQPFAPGSRRDAERLGVRMVMQELGLVTTLSVAENLLLDR-LPSKTGWIRRGKLNEL 124
              GQP +    RD++  G+ ++ QEL L+  L++AEN+ L R + S  G I   +++  
Sbjct: 63  EYQGQPVSFKGPRDSQLAGISIIHQELNLIPQLTIAENIFLGREMTSPFGRILWDEMHRK 122

Query: 125 AARQLAKIGMQNIDPATPVARLGIGQQQMVEIARNLQDDTRVLVLDEPTAMLTPRETSHL 184
           A + LA++ +++    T +  L +G+QQMVEIA+ L  +++V+++DEPT  LT  ET  L
Sbjct: 123 ADQLLARLNVKH-SAKTLLGELSLGEQQMVEIAKALSFESKVIIMDEPTDALTDTETESL 181

Query: 185 FEQIELLKARGVAIVYVSHRLEELQRIADRVAVLRDGRLVDVRAMAGVRESELVQRMVGR 244
           F  I  L+ +G  IVY+SHRL+E+  I D + VLRDG+ +    +    E  L++ MVGR
Sbjct: 182 FNVINELREQGCGIVYISHRLKEIFEICDDITVLRDGKFIGECRVCDTNEDGLIEMMVGR 241

Query: 245 AVHEHEGRERRTAGPVLLSARGIGRAQVVRDVDIDLRAGEVMGLAGLVGSGRTELVRLLF 304
            + E   R     G + L   G+     V DV   L+ GE++G++GL+G+GRTEL+++++
Sbjct: 242 KLEEQYPRIAAQQGDISLEVIGL-TGSGVHDVSFTLKKGEILGVSGLMGAGRTELMKVIY 300

Query: 305 GADRADRGEITLYENDQPVQQARKGWRSPMQAIRAGIGLVTEDRKSQGLLLTQSIRVNAT 364
           GA  ++RG I L  N + V        SP   +  GI  ++EDRK  GL+L  S++ N +
Sbjct: 301 GALPSERGVINL--NGRTVNPV-----SPQDGLANGIAYISEDRKGDGLVLGLSVKENMS 353

Query: 365 LSDLGAISRAGWLQRAKERGIAQKLVELLRIRSRSIEQPVATLSGGNQQKVVFARWLHRE 424
           L  L  +S+   ++ A E       + L  I++ S EQ +  LSGGNQQKV  A+ L  +
Sbjct: 354 LCALDQLSKGVQIRHADEVIAVDDFIRLFNIKTPSREQIIGNLSGGNQQKVAIAKGLMTK 413

Query: 425 CKVLLLDEPTRGVDVGARADLYAELDRMTDAGKALLMVSSDLRELMAMCDRIGVMSAGRL 484
            KVL+LDEPTRGVDVGA+ ++Y  +++    G ++++VSS++ E++ M DRI VM  GR+
Sbjct: 414 PKVLILDEPTRGVDVGAKKEIYQLINQFKAEGMSIILVSSEMPEVLGMSDRILVMHEGRI 473

Query: 485 VAVFERGEWTEQSLLAAAFSDATGRAA 511
              F   E  ++ L+A A       AA
Sbjct: 474 SGEFMASEADQEKLMACAVGRNPAHAA 500