Pairwise Alignments

Query, 542 a.a., Ribose ABC transporter, ATP-binding protein RbsA (TC 3.A.1.2.1) from Variovorax sp. SCN45

Subject, 503 a.a., sugar uptake ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  340 bits (872), Expect = 7e-98
 Identities = 209/511 (40%), Positives = 301/511 (58%), Gaps = 22/511 (4%)

Query: 1   MNDNRAQPVLSLSTMGKDYA-APVLDDVSLVLNAGEVLALTGENGAGKSTLSKIVCGLVQ 59
           M+ + A  +L ++ + K +     L  + L +  G V  L GENGAGKSTL KI+ G+  
Sbjct: 1   MHGSAADTILKITDVTKSFGQVAALKGMRLEVRRGRVHTLLGENGAGKSTLMKILAGVHG 60

Query: 60  PTRGQMLLDGQPFAPGSRRDAERLGVRMVMQELGLVTTLSVAENLLLDRLPSKTGWIRRG 119
            T G+++LDGQ + P + ++A  LG+ +V QEL L   L+VAEN+L  R P + G+I   
Sbjct: 61  ATSGEIVLDGQAYRPANPQEAASLGLAIVFQELSLCNNLTVAENILATREPRRFGFINDK 120

Query: 120 KLNELAARQLAKIGMQNIDPATPVARLGIGQQQMVEIARNLQDDTRVLVLDEPTAMLTPR 179
            L   A R +A + +  ID    V  L I Q+Q+VEIA+ L  D +V++LDEPT+ L+  
Sbjct: 121 ALVAKAHRIVADLRLP-IDVTEKVGNLSIAQRQLVEIAKGLSHDAKVVILDEPTSSLSDS 179

Query: 180 ETSHLFEQIELLKARGVAIVYVSHRLEELQRIADRVAVLRDGRLVDVRAMAGVRESELVQ 239
           E   LFE I  L+ RG AI+Y+SHR+EE+ R++D + V+RDG  V   A   V    L+ 
Sbjct: 180 EAEILFEIIGRLRQRGAAIIYISHRMEEIMRLSDDITVIRDGEYVSTHARDEVTIETLIA 239

Query: 240 RMVGRAVHE-------HEGRERRTAGPVLLSARGIGRAQVVRDVDIDLRAGEVMGLAGLV 292
            MVGR + E       H   +R    PVL   R + R    +DV  D+RAGE++G  GLV
Sbjct: 240 LMVGRRMDEIYPPPVHHVAADR---APVLAVDR-LTREGEFQDVSFDVRAGEILGFFGLV 295

Query: 293 GSGRTELVRLLFGADRADRGEITLYENDQPVQQARKGWRSPMQAIRAGIGLVTEDRKSQG 352
           GSGR+E++  LFG   A  G + L   D  V +    +RSP QAI  G+G VTE+RK +G
Sbjct: 296 GSGRSEVMNALFGMKSA-AGTVRL---DGEVVR----FRSPDQAIARGVGFVTENRKEEG 347

Query: 353 LLLTQSIRVNATLSDLGAISRA-GWLQRAKERGIAQKLVELLRIRSRSIEQPVATLSGGN 411
           L+L  S+  N +++ L   +   G+++   ER  A + V  L I++ S+E P   LSGGN
Sbjct: 348 LVLGHSVEWNISMAALADFAGGLGFIRNGAERAAASEQVGKLSIKTNSLETPAGALSGGN 407

Query: 412 QQKVVFARWLHRECKVLLLDEPTRGVDVGARADLYAELDRMTDAGKALLMVSSDLRELMA 471
           QQK+V A+WL    KVL+LDEPTRGVDVGA+ ++Y  +  +   G A+L++SSDL E++ 
Sbjct: 408 QQKIVLAKWLLTRPKVLILDEPTRGVDVGAKFEIYKIIRELAAEGTAILLISSDLPEVLG 467

Query: 472 MCDRIGVMSAGRLVAVFERGEWTEQSLLAAA 502
           M DR+ VM  G   A  E    T ++++A A
Sbjct: 468 MSDRVVVMHEGAPGATLEGSALTPETIMAHA 498