Pairwise Alignments

Query, 542 a.a., Ribose ABC transporter, ATP-binding protein RbsA (TC 3.A.1.2.1) from Variovorax sp. SCN45

Subject, 497 a.a., sugar uptake ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  359 bits (921), Expect = e-103
 Identities = 209/498 (41%), Positives = 298/498 (59%), Gaps = 13/498 (2%)

Query: 9   VLSLSTMGKDY-AAPVLDDVSLVLNAGEVLALTGENGAGKSTLSKIVCGLVQPTRGQMLL 67
           +LS+  + K +   P L   SL +   EV+AL G+NGAGKSTL KI+ G  +   G ++ 
Sbjct: 2   LLSMQGICKSFNGIPALRAASLEVGEAEVMALVGQNGAGKSTLIKILTGAYRRDEGAVVF 61

Query: 68  DGQPFAPGSRRDAERLGVRMVMQELGLVTTLSVAENLLLDRLPSKTGWIRRGKLNELAAR 127
            G+  +     +++  G+  + QE+ L    SVAEN+ L R P + G I R  + + AA 
Sbjct: 62  AGEGVSFSMPAESQARGIATIYQEINLAPQRSVAENIYLSREPRRFGLIDRRAMRDGAAA 121

Query: 128 QLAKIGMQNIDPATPVARLGIGQQQMVEIARNLQDDTRVLVLDEPTAMLTPRETSHLFEQ 187
            L    ++ ID   PVA      +QMV IAR +    R++++DEPT+ L  RE   LF+ 
Sbjct: 122 VLRAFNLE-IDVDQPVAGFSAATRQMVAIARAVTQKARLVIMDEPTSSLDEREVGILFDT 180

Query: 188 IELLKARGVAIVYVSHRLEELQRIADRVAVLRDGRLVDVRAMAGVRESELVQRMVGRAVH 247
           I  LK  GV++V++ HRLEEL RI DRV ++RDG+ V   AMA + +  LV+ M+G+ + 
Sbjct: 181 IRTLKRGGVSVVFIGHRLEELYRICDRVTIMRDGKTVATAAMADMPKLALVRHMLGKELA 240

Query: 248 EHEG----RERRTAGPVLLSARGIGRAQVVRDVDIDLRAGEVMGLAGLVGSGRTELVRLL 303
             E      +     PV LS R  G    VRDV + +R GE+ GLAGL+GSGRTE   L+
Sbjct: 241 AFEAIAKDADEGAQRPVRLSVRNAGAGVRVRDVSLTVREGEISGLAGLLGSGRTETANLI 300

Query: 304 FGADRADRGEITLYENDQPVQQARKGWRSPMQAIRAGIGLVTEDRKSQGLLLTQSIRVNA 363
           FGADR  RGEI  Y  +       + +R P  AI  GIGLV EDRK  G++   SIR N 
Sbjct: 301 FGADRLQRGEIR-YNGEA------RAYRQPADAIADGIGLVAEDRKVDGIIPDMSIRENM 353

Query: 364 TLSDLGAISRAGWLQRAKERGIAQKLVELLRIRSRSIEQPVATLSGGNQQKVVFARWLHR 423
           TL+ L  ++RAG + RA++  I ++ +  L I+  S +QP+  LSGGNQQKV+  RWL  
Sbjct: 354 TLALLPKLARAGIVDRARQDEIVERYITALAIKCTSPDQPIKELSGGNQQKVLLGRWLCT 413

Query: 424 ECKVLLLDEPTRGVDVGARADLYAELDRMTDAGKALLMVSSDLRELMAMCDRIGVMSAGR 483
           + K+L++DEPTRG+D+GA++++   L R+ D G  +LM+SS+L EL+A  DR+ V+S G 
Sbjct: 414 DPKLLIVDEPTRGIDIGAKSEILRLLRRLADEGLGVLMISSELEELLAAADRVTVLSDGT 473

Query: 484 LVAVFERGEWTEQSLLAA 501
            VAV  R E +E +L AA
Sbjct: 474 SVAVLPRKELSEAALFAA 491



 Score =  103 bits (257), Expect = 2e-26
 Identities = 66/221 (29%), Positives = 113/221 (51%), Gaps = 5/221 (2%)

Query: 26  DVSLVLNAGEVLALTGENGAGKSTLSKIVCGLVQPTRGQMLLDGQPFAPGSRRDAERLGV 85
           DVSL +  GE+  L G  G+G++  + ++ G  +  RG++  +G+  A     DA   G+
Sbjct: 272 DVSLTVREGEISGLAGLLGSGRTETANLIFGADRLQRGEIRYNGEARAYRQPADAIADGI 331

Query: 86  RMVMQEL---GLVTTLSVAENLLLDRLP--SKTGWIRRGKLNELAARQLAKIGMQNIDPA 140
            +V ++    G++  +S+ EN+ L  LP  ++ G + R + +E+  R +  + ++   P 
Sbjct: 332 GLVAEDRKVDGIIPDMSIRENMTLALLPKLARAGIVDRARQDEIVERYITALAIKCTSPD 391

Query: 141 TPVARLGIGQQQMVEIARNLQDDTRVLVLDEPTAMLTPRETSHLFEQIELLKARGVAIVY 200
            P+  L  G QQ V + R L  D ++L++DEPT  +     S +   +  L   G+ ++ 
Sbjct: 392 QPIKELSGGNQQKVLLGRWLCTDPKLLIVDEPTRGIDIGAKSEILRLLRRLADEGLGVLM 451

Query: 201 VSHRLEELQRIADRVAVLRDGRLVDVRAMAGVRESELVQRM 241
           +S  LEEL   ADRV VL DG  V V     + E+ L   M
Sbjct: 452 ISSELEELLAAADRVTVLSDGTSVAVLPRKELSEAALFAAM 492