Pairwise Alignments

Query, 542 a.a., Ribose ABC transporter, ATP-binding protein RbsA (TC 3.A.1.2.1) from Variovorax sp. SCN45

Subject, 504 a.a., sugar uptake ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  367 bits (943), Expect = e-106
 Identities = 205/492 (41%), Positives = 316/492 (64%), Gaps = 14/492 (2%)

Query: 11  SLSTMGKDYAA-PVLDDVSLVLNAGEVLALTGENGAGKSTLSKIVCGLVQPTRGQMLLDG 69
           +L ++ K +     L  V+  +  GEV AL GENGAGKSTL +++ G + P++G+++++G
Sbjct: 7   NLKSISKSFGGIHALRSVNFDVRPGEVHALLGENGAGKSTLMRVLGGEIIPSQGEVVING 66

Query: 70  QPFAPGSRRDAERLGVRMVMQELGLVTTLSVAENLLLDRLPSKTGWIRRGKLNELAARQL 129
           +       RDA  LG+ ++ QEL L   LSVAEN+ L  LP+    I R  L   A + +
Sbjct: 67  KRTELRDPRDARALGIVVIHQELALAPDLSVAENIFLGELPTL---ISRFSLRRRAKQLI 123

Query: 130 AKIGMQNIDPATPVARLGIGQQQMVEIARNLQDDTRVLVLDEPTAMLTPRETSHLFEQIE 189
            ++G  +IDP   V  L +  QQ+VEIA+ L  D +++V DEPTA+L  ++   L + I 
Sbjct: 124 DRLGF-DIDPGRLVGTLSVAHQQVVEIAKALSQDIKIIVFDEPTAVLGAQDAMKLHQIIR 182

Query: 190 LLKARGVAIVYVSHRLEELQRIADRVAVLRDGRLVDVRAMAGVRESELVQRMVGRAV-HE 248
            L+ RGV IVY+SHRL+E+  IADR+ V++DG  V   A   V+  ++++ MVGR + + 
Sbjct: 183 GLRDRGVGIVYISHRLDEVFDIADRMTVMKDGETVGTVATTDVKIDDIIRMMVGRPIANM 242

Query: 249 HEGRERRTAGPVLLSARGIGRAQVVRDVDIDLRAGEVMGLAGLVGSGRTELVRLLFGADR 308
              R +RT G  LL+ + +   ++VRDV   +RAGE++GL GL+GSGRTE+ R +FGAD 
Sbjct: 243 FPERSQRTIGAELLNVKKLNAGRMVRDVSFSVRAGEIVGLGGLIGSGRTEVARAIFGADP 302

Query: 309 ADRGEITLYENDQPVQQARKGWRSPMQAIRAGIGLVTEDRKSQGLLLTQSIRVNATLSDL 368
            D G I+L      +       +SP  A++AGIGLV EDRK  G+++ + IRVNAT++ +
Sbjct: 303 LDSGTISLKGKALKL-------KSPRDAVKAGIGLVPEDRKEHGVVIDKPIRVNATMARM 355

Query: 369 GAISRA-GWLQRAKERGIAQKLVELLRIRSRSIEQPVATLSGGNQQKVVFARWLHRECKV 427
            ++  A G+L+ A ER     L + LR+++ SI+ PV++LSGGNQQKVV A+W H    V
Sbjct: 356 SSVVNALGFLKPALERTDVTALGKSLRLKASSIDAPVSSLSGGNQQKVVLAKWFHAGGDV 415

Query: 428 LLLDEPTRGVDVGARADLYAELDRMTDAGKALLMVSSDLRELMAMCDRIGVMSAGRLVAV 487
           ++LDEPTRGVDVGA+A++YA ++++ + GKA+L++SS+ +EL  +CDR+  M  G++   
Sbjct: 416 IILDEPTRGVDVGAKAEIYALINKLAEDGKAVLVISSEHQELFGLCDRVLAMGQGQIRGE 475

Query: 488 FERGEWTEQSLL 499
                ++E++LL
Sbjct: 476 LTPSNYSEENLL 487