Pairwise Alignments

Query, 542 a.a., Ribose ABC transporter, ATP-binding protein RbsA (TC 3.A.1.2.1) from Variovorax sp. SCN45

Subject, 513 a.a., sugar uptake ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  328 bits (841), Expect = 3e-94
 Identities = 184/501 (36%), Positives = 299/501 (59%), Gaps = 11/501 (2%)

Query: 5   RAQPVLSLSTMGKDYAAPV-LDDVSLVLNAGEVLALTGENGAGKSTLSKIVCGLVQPTRG 63
           +++ +L+   + K++   V LDDV   L  G V AL GENGAGKSTL KI+ G+  P +G
Sbjct: 19  KSEYLLTAEGVRKEFPGVVALDDVEFKLKRGTVHALMGENGAGKSTLMKILAGIYYPDQG 78

Query: 64  QMLLDGQPFAPGSRRDAERLGVRMVMQELGLVTTLSVAENLLLDRLP-SKTGWIRRGKLN 122
           ++ L G      S  DA   G+ M+ QEL L+  ++VAEN+ + R P ++ G++  G++ 
Sbjct: 79  EVKLRGAGIRLKSPLDALENGIAMIHQELNLMPFMTVAENIWIRREPKNRFGFVDHGEMR 138

Query: 123 ELAARQLAKIGMQNIDPATPVARLGIGQQQMVEIARNLQDDTRVLVLDEPTAMLTPRETS 182
            + A+   ++ + ++DP   V  L +  +QMVEIA+ +  ++ VL++DEPT+ LT RE +
Sbjct: 139 RMTAKLFERLKI-DLDPEIEVRHLSVANRQMVEIAKAVSYESDVLIMDEPTSALTEREVA 197

Query: 183 HLFEQIELLKARGVAIVYVSHRLEELQRIADRVAVLRDGRLVDVRAMAGVRESELVQRMV 242
           HLFE I  L+++G+ IVY++H++ EL  IAD  +V RDG+ +       V   ++++ MV
Sbjct: 198 HLFEIIRDLRSQGIGIVYITHKMNELFEIADEFSVFRDGKYIGTHLSNEVTRDDIIRMMV 257

Query: 243 GRAVHEHEGRERRTAGPVLLSARGIGRAQVVRDVDIDLRAGEVMGLAGLVGSGRTELVRL 302
           GR + +   +E    G V+LS + +    V RDV  D+RAGE++G+AGLVGSGR+ +   
Sbjct: 258 GREITQMFPKEEVPIGDVVLSVKNLTLNGVFRDVSFDVRAGEILGVAGLVGSGRSNVAET 317

Query: 303 LFGADRADRGEITLYENDQPVQQARKGWRSPMQAIRAGIGLVTEDRKSQGLLLTQSIRVN 362
           LFG   A  G I +   +  +  A K       AIR  +  +TEDRK  G LL   I  N
Sbjct: 318 LFGVTPASSGTIAIDGKEVVIDSANK-------AIRHRMAFLTEDRKDTGCLLILDILEN 370

Query: 363 ATLSDL-GAISRAGWLQRAKERGIAQKLVELLRIRSRSIEQPVATLSGGNQQKVVFARWL 421
             ++ L     + G++   +     +++   LR+++ ++++ V  LSGGNQQKV+  RWL
Sbjct: 371 MQIAVLQDKFVKRGFVSEREVTAACEEMSRKLRVKTPNLQERVENLSGGNQQKVLIGRWL 430

Query: 422 HRECKVLLLDEPTRGVDVGARADLYAELDRMTDAGKALLMVSSDLRELMAMCDRIGVMSA 481
               ++L+LDEPTRG+DVGA+A+++  +  +   G A++M+SS++ E++ M DRI VM  
Sbjct: 431 LTNPRILILDEPTRGIDVGAKAEIHRLVTELARNGVAVIMISSEMPEVLGMSDRIMVMHE 490

Query: 482 GRLVAVFERGEWTEQSLLAAA 502
           GR+  + +R E T+  ++  A
Sbjct: 491 GRVTGILDRAEATQIKVMELA 511