Pairwise Alignments

Query, 542 a.a., Ribose ABC transporter, ATP-binding protein RbsA (TC 3.A.1.2.1) from Variovorax sp. SCN45

Subject, 508 a.a., L-arabinose transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  358 bits (919), Expect = e-103
 Identities = 207/508 (40%), Positives = 307/508 (60%), Gaps = 11/508 (2%)

Query: 7   QPVLSLSTMGKDY-AAPVLDDVSLVLNAGEVLALTGENGAGKSTLSKIVCGLVQPTRGQM 65
           Q  L   ++ K Y     L +VS  +  G V  L GENGAGKSTL +++ G      G++
Sbjct: 2   QDFLEFQSISKGYPGVQALSEVSFSVRKGAVHGLMGENGAGKSTLIRVLSGDQAADTGEI 61

Query: 66  LLDGQPFAPGSRRDAERLGVRMVMQELGLVTTLSVAENLLLDRLPSKTGWIRRGKLNELA 125
            ++G+P    S RDA   GV ++ QEL LV  L+VAENL L R P K G I R +L  + 
Sbjct: 62  RINGEPQHYRSVRDAFNAGVIVIHQELQLVPELTVAENLWLGRFPGKAGVIDRRQLIRVV 121

Query: 126 ARQLAKIGMQNIDPATPVARLGIGQQQMVEIARNLQDDTRVLVLDEPTAMLTPRETSHLF 185
           + +LA+IG+ ++DP   VA L IG++QMVEIA+ +  D RV+ LDEPT+ L+ RE+  LF
Sbjct: 122 SDRLAEIGI-DVDPEAKVASLSIGERQMVEIAKAVMTDARVIALDEPTSSLSSRESEILF 180

Query: 186 EQIELLKARGVAIVYVSHRLEELQRIADRVAVLRDGRLVDVRA-MAGVRESELVQRMVGR 244
             I+ L++ G  I+YVSHRL+E+ R+ + + VLRDGRL      ++ V   +++  MVGR
Sbjct: 181 ALIDRLRSNGTVILYVSHRLDEIFRLCNSLTVLRDGRLAAHHPDISKVGREQIIAEMVGR 240

Query: 245 AVHEHEGRERRTAGPVLLSARGIGRAQVVRDVDIDLRAGEVMGLAGLVGSGRTELVRLLF 304
            +    G   RT G   L+   +  A + + +   +RAGE++G  GL+G+GR+E+ RL++
Sbjct: 241 EISNIWGWRARTLGAARLTVERVSGANLPQPISFTVRAGEILGFFGLIGAGRSEMARLVY 300

Query: 305 GADRADRGEITLYENDQPVQQARKGWRSPMQAIRAGIGLVTEDRKSQGLLLTQSIRVNAT 364
           GADR  +G++ +     P         SP  +IRAG+ L  EDRK  G++  +SI  N  
Sbjct: 301 GADRRRQGKVLVDGLAVPAD-------SPRLSIRAGVVLCPEDRKFDGIVQGRSIEENMA 353

Query: 365 LSDLGAISRAGWLQRAKERGIAQKLVELLRIRSRSIEQPVATLSGGNQQKVVFARWLHRE 424
           +S     S  G + + KE  +A++ +  LR+R+ S  Q +  LSGGNQQKV+  RWL  E
Sbjct: 354 ISSRRHFSPFGVVDKGKEAELAERFIAKLRVRTPSRHQDIVNLSGGNQQKVILGRWLSEE 413

Query: 425 -CKVLLLDEPTRGVDVGARADLYAELDRMTDAGKALLMVSSDLRELMAMCDRIGVMSAGR 483
             KVLL+DEPTRG+DVGA++++Y  L  +   G A++++SS+L E+M + DRI VM  GR
Sbjct: 414 GVKVLLIDEPTRGIDVGAKSEIYEILYELAAQGMAIVVISSELPEVMGIADRILVMCEGR 473

Query: 484 LVAVFERGEWTEQSLLAAAFSDATGRAA 511
           + A  +R ++ E  +LAAA  DA+   A
Sbjct: 474 IAAEIDRSDFDEHRILAAALPDASATTA 501