Pairwise Alignments

Query, 542 a.a., Ribose ABC transporter, ATP-binding protein RbsA (TC 3.A.1.2.1) from Variovorax sp. SCN45

Subject, 493 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

 Score =  329 bits (843), Expect = 2e-94
 Identities = 202/499 (40%), Positives = 295/499 (59%), Gaps = 10/499 (2%)

Query: 6   AQPVLSLSTMGKDYAAP-VLDDVSLVLNAGEVLALTGENGAGKSTLSKIVCGLVQPTRGQ 64
           + P+L++  + K YA    L D +L L  G++ AL G NGAGKST+  I+ G  +P  G+
Sbjct: 2   SSPLLTMRGIRKSYAGVHALVDGNLDLERGQIHALCGGNGAGKSTILGILMGFTRPDCGE 61

Query: 65  MLLDGQPFAPGSRRDAERLGVRMVMQELGLVTTLSVAENLLLDRLPSKTGWIRRGKLNEL 124
           + ++G+P +  +   A + G+ +V QEL  V  L+VAEN+ L   P + G++   +LN  
Sbjct: 62  IRIEGKPVSFANPTQALQAGIAIVQQELSGVPHLTVAENIYLGAEPRRRGFVDFPQLNRQ 121

Query: 125 AARQLAKIGMQNIDPATPVARLGIGQQQMVEIARNL-QDDTRVLVLDEPTAMLTPRETSH 183
           A   LA +G  +IDP  P+A L I  QQ++EIA+ L + D  +L+ DEPT+ +  ++T  
Sbjct: 122 AEELLASLGF-DIDPRVPLASLSIASQQLIEIAKALSRRDADILIFDEPTSAIGEKDTLR 180

Query: 184 LFEQIELLKARGVAIVYVSHRLEELQRIADRVAVLRDGRLVDVRAMAGVRESELVQRMVG 243
           LFE +  L A G  I+YV+HRL E+  IAD   V +DG  ++   +A +   +L++ M+G
Sbjct: 181 LFEVLRDLAAAGKGIIYVTHRLAEVFTIADSYTVFKDGARIETGRVADITREKLIESMIG 240

Query: 244 RAVHEHEGRERRTAGPVLLSARGIGRAQVVRDVDIDLRAGEVMGLAGLVGSGRTELVRLL 303
            A+     +E   +   LL  RG+ RA     V   L AGE++G+ GLVGSGR++L+  +
Sbjct: 241 GAIEGEYVKENVPSDRPLLDVRGLSRAPWFDRVSFTLHAGEILGIYGLVGSGRSQLLDTI 300

Query: 304 FGADRADRGEITLYENDQPVQQARKGWRSPMQAIRAGIGLVTEDRKSQGLLLTQSIRVNA 363
           +G   AD G  T++   + ++  R        A+ AGI  VTEDRK  GL+L  S+  N 
Sbjct: 301 YGLYPADAG--TVWVEGREIRPGRV-----RAALGAGISYVTEDRKHSGLVLCASVGDNL 353

Query: 364 TLSDLGAISRAGWLQRAKERGIAQKLVELLRIRSRSIEQPVATLSGGNQQKVVFARWLHR 423
           +LS L  I R G+++ A ER      +  +RI++   EQ V  LSGGNQQKVVF R    
Sbjct: 354 SLSQLPHIQRFGFIRTALERAGIDDSIAKMRIKTPGPEQIVRNLSGGNQQKVVFGRCTSI 413

Query: 424 ECKVLLLDEPTRGVDVGARADLYAELDRMTDAGKALLMVSSDLRELMAMCDRIGVMSAGR 483
             KVLLLDEPTRGVDVGA+ ++Y  +   T AG A+LMVSS+L E+  M DRI V+  G 
Sbjct: 414 GPKVLLLDEPTRGVDVGAKKEIYRFVSDFTKAGGAVLMVSSELDEITGMSDRIIVIKKGA 473

Query: 484 LVAVFERGEWTEQSLLAAA 502
            VA F R E T+++L+ AA
Sbjct: 474 HVAEFPREETTQKALMMAA 492



 Score = 72.8 bits (177), Expect = 3e-17
 Identities = 67/254 (26%), Positives = 119/254 (46%), Gaps = 24/254 (9%)

Query: 261 LLSARGIGRA----QVVRDVDIDLRAGEVMGLAGLVGSGRTELVRLLFGADRADRGEITL 316
           LL+ RGI ++      + D ++DL  G++  L G  G+G++ ++ +L G  R D GEI +
Sbjct: 5   LLTMRGIRKSYAGVHALVDGNLDLERGQIHALCGGNGAGKSTILGILMGFTRPDCGEIRI 64

Query: 317 YENDQPVQQARKGWRSPMQAIRAGIGLVTEDRKS-QGLLLTQSIRVNATLSDLGAISRAG 375
               +PV  A     +P QA++AGI +V ++      L + ++I + A     G +    
Sbjct: 65  --EGKPVSFA-----NPTQALQAGIAIVQQELSGVPHLTVAENIYLGAEPRRRGFVDFPQ 117

Query: 376 WLQRAKERGIAQKLVELLRIRSRSIEQ--PVATLSGGNQQKVVFARWL-HRECKVLLLDE 432
             ++A+E         LL      I+   P+A+LS  +QQ +  A+ L  R+  +L+ DE
Sbjct: 118 LNRQAEE---------LLASLGFDIDPRVPLASLSIASQQLIEIAKALSRRDADILIFDE 168

Query: 433 PTRGVDVGARADLYAELDRMTDAGKALLMVSSDLRELMAMCDRIGVMSAGRLVAVFERGE 492
           PT  +       L+  L  +  AGK ++ V+  L E+  + D   V   G  +      +
Sbjct: 169 PTSAIGEKDTLRLFEVLRDLAAAGKGIIYVTHRLAEVFTIADSYTVFKDGARIETGRVAD 228

Query: 493 WTEQSLLAAAFSDA 506
            T + L+ +    A
Sbjct: 229 ITREKLIESMIGGA 242