Pairwise Alignments

Query, 542 a.a., Ribose ABC transporter, ATP-binding protein RbsA (TC 3.A.1.2.1) from Variovorax sp. SCN45

Subject, 503 a.a., ribose import ATP-binding protein RbsA from Phaeobacter inhibens DSM 17395

 Score =  326 bits (836), Expect = 1e-93
 Identities = 200/496 (40%), Positives = 277/496 (55%), Gaps = 10/496 (2%)

Query: 8   PVLSLSTMGKDY-AAPVLDDVSLVLNAGEVLALTGENGAGKSTLSKIVCGLVQPTRGQML 66
           PVL L  + K +     LD VSL +  GEV AL GENGAGKSTL K++ G+ QP  GQ++
Sbjct: 6   PVLRLEGIVKTFPGVRALDGVSLTILPGEVHALMGENGAGKSTLMKVLGGIHQPDEGQII 65

Query: 67  LDGQPFAPGSRRDAERLGVRMVMQELGLVTTLSVAENLLLDRLPSKT-GWIRRGKLNELA 125
           +  QP       DA+  G+  + QEL L   LSVAEN+ L  LP K  G +   +L    
Sbjct: 66  VAEQPVVMSGPLDAKAKGIVFIHQELSLADELSVAENIYLGELPRKRFGLVDWAELEAKT 125

Query: 126 ARQLAKIGMQNIDPATPVARLGIGQQQMVEIARNLQDDTRVLVLDEPTAMLTPRETSHLF 185
              L K+ +   +  T V  L I  QQMVEIAR L  D + ++ DEPTA LT  E   LF
Sbjct: 126 NAILEKLKV-GFNAKTRVGDLSIANQQMVEIARALTVDAKAVIFDEPTASLTDAEKVVLF 184

Query: 186 EQIELLKARGVAIVYVSHRLEELQRIADRVAVLRDGRLVDVRAMAGVRESELVQRMVGRA 245
           E I  L+ +GV I Y+SHR+EE+ +I DR++VLRDG+       A   E  + Q M+GR 
Sbjct: 185 EVISDLQEQGVGIAYISHRMEEIFKITDRISVLRDGQYQGTVNTAETNEENVTQMMIGRK 244

Query: 246 VHEHEGRERRTAGPVLLSARGIGRAQVVRDVDIDLRAGEVMGLAGLVGSGRTELVRLLFG 305
           +           G V L  RG+    +  DV+ ++R GEV+G  GLVG+GRTE+   LFG
Sbjct: 245 LDLSRNEAHHELGEVALEVRGLSCGSLFEDVNFEVRRGEVVGFYGLVGAGRTEIAETLFG 304

Query: 306 ADRADRGEITLYENDQPVQQARKGWRSPMQAIRAGIGLVTEDRKSQGLLLTQSIRVNATL 365
                 G I L         A     SP  AI  GI LV EDRK QGL+L  + R N TL
Sbjct: 305 LRNPTSGSIFL-------DGAEVAITSPHDAIERGISLVPEDRKGQGLVLGMNCRDNMTL 357

Query: 366 SDLGAISRAGWLQRAKERGIAQKLVELLRIRSRSIEQPVATLSGGNQQKVVFARWLHREC 425
             +  +    ++    E  I  +  + L IR+   +Q V  LSGGNQQK+V  +WL    
Sbjct: 358 PQVDDLKAGPFVADGAEIAIFDQYRDKLDIRTPGWKQLVGNLSGGNQQKIVIGKWLSMRP 417

Query: 426 KVLLLDEPTRGVDVGARADLYAELDRMTDAGKALLMVSSDLRELMAMCDRIGVMSAGRLV 485
            VL++DEPTRG+DVG++A+++  L  +   G A++++SS++ E++ + DRI  M +GR++
Sbjct: 418 NVLIVDEPTRGIDVGSKAEIHNLLRDLAAQGYAVIVISSEMPEVLHVADRIVAMYSGRIM 477

Query: 486 AVFERGEWTEQSLLAA 501
             F   E TE++L+AA
Sbjct: 478 RTFTSEEVTEENLIAA 493



 Score = 86.3 bits (212), Expect = 3e-21
 Identities = 60/226 (26%), Positives = 110/226 (48%), Gaps = 5/226 (2%)

Query: 23  VLDDVSLVLNAGEVLALTGENGAGKSTLSKIVCGLVQPTRGQMLLDGQPFAPGSRRDAER 82
           + +DV+  +  GEV+   G  GAG++ +++ + GL  PT G + LDG   A  S  DA  
Sbjct: 271 LFEDVNFEVRRGEVVGFYGLVGAGRTEIAETLFGLRNPTSGSIFLDGAEVAITSPHDAIE 330

Query: 83  LGVRMVMQEL---GLVTTLSVAENLLLDRLPS-KTG-WIRRGKLNELAARQLAKIGMQNI 137
            G+ +V ++    GLV  ++  +N+ L ++   K G ++  G    +  +   K+ ++  
Sbjct: 331 RGISLVPEDRKGQGLVLGMNCRDNMTLPQVDDLKAGPFVADGAEIAIFDQYRDKLDIRTP 390

Query: 138 DPATPVARLGIGQQQMVEIARNLQDDTRVLVLDEPTAMLTPRETSHLFEQIELLKARGVA 197
                V  L  G QQ + I + L     VL++DEPT  +     + +   +  L A+G A
Sbjct: 391 GWKQLVGNLSGGNQQKIVIGKWLSMRPNVLIVDEPTRGIDVGSKAEIHNLLRDLAAQGYA 450

Query: 198 IVYVSHRLEELQRIADRVAVLRDGRLVDVRAMAGVRESELVQRMVG 243
           ++ +S  + E+  +ADR+  +  GR++       V E  L+  + G
Sbjct: 451 VIVISSEMPEVLHVADRIVAMYSGRIMRTFTSEEVTEENLIAAISG 496