Pairwise Alignments

Query, 542 a.a., Ribose ABC transporter, ATP-binding protein RbsA (TC 3.A.1.2.1) from Variovorax sp. SCN45

Subject, 513 a.a., xylose ABC transporter ATP-binding protein from Klebsiella michiganensis M5al

 Score =  316 bits (810), Expect = 1e-90
 Identities = 189/505 (37%), Positives = 297/505 (58%), Gaps = 18/505 (3%)

Query: 9   VLSLSTMGKDYAA-PVLDDVSLVLNAGEVLALTGENGAGKSTLSKIVCGLVQ--PTRGQM 65
           +L +  + K + A   +D+VSL LNAGEV++L GENG+GKSTL K++CG+       G++
Sbjct: 4   LLEMKNITKTFGAVKAIDNVSLRLNAGEVVSLCGENGSGKSTLMKVLCGIYPHGSYEGEI 63

Query: 66  LLDGQPFAPGSRRDAERLGVRMVMQELGLVTTLSVAENLLLDRLPSKTGWIRRGKLNELA 125
           +  G+   PG  RD ER G+ ++ QEL LV  L+V EN+ L    S+ G +    +    
Sbjct: 64  IFSGETLQPGHIRDTERKGIAIIHQELALVKHLTVLENIFLGAEISRHGLLDYETMTLRC 123

Query: 126 ARQLAKIGMQNIDPATPVARLGIGQQQMVEIARNLQDDTRVLVLDEPTAMLTPRETSHLF 185
            + LA++ +  I P T V  LG+GQQQ+VEIA+ L    R+L+LDEPTA LT +ET+ L 
Sbjct: 124 EKLLAQVNLA-ISPDTRVGDLGLGQQQLVEIAKALNKQVRLLILDEPTASLTEQETAILL 182

Query: 186 EQIELLKARGVAIVYVSHRLEELQRIADRVAVLRDGRLVDVRAMAGVRESELVQRMVGRA 245
             I  L+  G+A +Y+SH+L E++ I+D + V+RDG+ +  R   G+ E +++  MVGR 
Sbjct: 183 NIIRDLQNHGIACIYISHKLNEVKAISDTICVIRDGQHIGTRNADGMSEDDIITMMVGRE 242

Query: 246 VHEHEGRERRTAGPVLLSARGI-------GRAQVVRDVDIDLRAGEVMGLAGLVGSGRTE 298
           +      E  + G  +L    +          + V DV   LR GE++G+AGLVG+GRTE
Sbjct: 243 LTALYPSEAHSCGDEILRVENLTAWHPVNRHIKRVNDVSFSLRRGEILGIAGLVGAGRTE 302

Query: 299 LVRLLFGADRADRGEITLYENDQPVQQARKGWRSPMQAIRAGIGLVTEDRKSQGLLLTQS 358
            V+ LFG     R +  ++ + QPV        +  QAI  GI +V EDRK  G++   +
Sbjct: 303 AVQCLFGV-WPGRWQGKIFIDGQPVT-----IHTCQQAIAQGIAMVPEDRKKDGIVPVMA 356

Query: 359 IRVNATLSDLGAIS-RAGWLQRAKERGIAQKLVELLRIRSRSIEQPVATLSGGNQQKVVF 417
           +  N TL+ L   +     L  A E+   Q+ ++ L+I++ S E  +  LSGGNQQK + 
Sbjct: 357 VGKNITLAALNQFTGPLSSLDDAGEQLCIQQSIQRLKIKTSSPELAIGRLSGGNQQKAIL 416

Query: 418 ARWLHRECKVLLLDEPTRGVDVGARADLYAELDRMTDAGKALLMVSSDLRELMAMCDRIG 477
           AR L    ++L+LDEPTRG+D+GA+ ++Y  ++++   G A++++SS+L E++ + DR+ 
Sbjct: 417 ARCLLLNPRILILDEPTRGIDIGAKYEIYKLINQLVQQGIAVIVISSELPEVLGLSDRVL 476

Query: 478 VMSAGRLVAVFERGEWTEQSLLAAA 502
           VM  G+L A       T++ ++ AA
Sbjct: 477 VMHEGKLKANLINQGLTQEQVMEAA 501



 Score = 92.0 bits (227), Expect = 5e-23
 Identities = 68/236 (28%), Positives = 124/236 (52%), Gaps = 11/236 (4%)

Query: 24  LDDVSLVLNAGEVLALTGENGAGKSTLSKIVCGLVQPTR--GQMLLDGQPFAPGSRRDAE 81
           ++DVS  L  GE+L + G  GAG++   + + G V P R  G++ +DGQP    + + A 
Sbjct: 277 VNDVSFSLRRGEILGIAGLVGAGRTEAVQCLFG-VWPGRWQGKIFIDGQPVTIHTCQQAI 335

Query: 82  RLGVRMVMQEL---GLVTTLSVAENLLLDRLPSKTGWIRR--GKLNELAARQ-LAKIGMQ 135
             G+ MV ++    G+V  ++V +N+ L  L   TG +        +L  +Q + ++ ++
Sbjct: 336 AQGIAMVPEDRKKDGIVPVMAVGKNITLAALNQFTGPLSSLDDAGEQLCIQQSIQRLKIK 395

Query: 136 NIDPATPVARLGIGQQQMVEIARNLQDDTRVLVLDEPTAMLTPRETSHLFEQIELLKARG 195
              P   + RL  G QQ   +AR L  + R+L+LDEPT  +       +++ I  L  +G
Sbjct: 396 TSSPELAIGRLSGGNQQKAILARCLLLNPRILILDEPTRGIDIGAKYEIYKLINQLVQQG 455

Query: 196 VAIVYVSHRLEELQRIADRVAVLRDGRLVDVRAMAGVRESELVQRMV--GRAVHEH 249
           +A++ +S  L E+  ++DRV V+ +G+L       G+ + ++++  +   R V EH
Sbjct: 456 IAVIVISSELPEVLGLSDRVLVMHEGKLKANLINQGLTQEQVMEAALRSERHVEEH 511