Pairwise Alignments
Query, 542 a.a., Ribose ABC transporter, ATP-binding protein RbsA (TC 3.A.1.2.1) from Variovorax sp. SCN45
Subject, 504 a.a., L-arabinose transporter ATP-binding protein from Klebsiella michiganensis M5al
Score = 321 bits (822), Expect = 5e-92
Identities = 195/481 (40%), Positives = 278/481 (57%), Gaps = 10/481 (2%)
Query: 24 LDDVSLVLNAGEVLALTGENGAGKSTLSKIVCGLVQPTRGQMLLDGQPFAPGSRRDAERL 83
L D+S AG+V AL GENGAGKSTL KI+ G PT G + + GQ +A
Sbjct: 23 LSDISFGCYAGQVHALMGENGAGKSTLLKILSGNYIPTAGSLQIRGQQMTFNHTTEALNA 82
Query: 84 GVRMVMQELGLVTTLSVAENLLLDRLPSKTGWIRRGKLNELAARQLAKIGMQNIDPATPV 143
GV ++ QEL L+ ++VAEN+ L +LP K G + R LN A QL +G+ +IDP TP+
Sbjct: 83 GVAIIYQELHLIPEMTVAENIYLGQLPHKGGIVNRSLLNYEAGLQLKHLGL-DIDPETPL 141
Query: 144 ARLGIGQQQMVEIARNLQDDTRVLVLDEPTAMLTPRETSHLFEQIELLKARGVAIVYVSH 203
L IGQ QMVEIA+ L + +++ DEPT+ L+ RE +LF I L+ G I+YVSH
Sbjct: 142 KYLSIGQWQMVEIAKALARNAKIIAFDEPTSSLSAREIENLFRVIRELRQEGRVIIYVSH 201
Query: 204 RLEELQRIADRVAVLRDGRLVDV-RAMAGVRESELVQRMVGRAVHEHEGRERRTAGPVLL 262
R+EE+ ++D + V +DGR V M V LVQ MVGR + G + R G L
Sbjct: 202 RMEEIFALSDAITVFKDGRYVRTFDNMQEVNHDALVQAMVGRELGNIYGWQPREYGKERL 261
Query: 263 SARGIGRAQVVRDVDIDLRAGEVMGLAGLVGSGRTELVRLLFGADRADRGEITLYENDQP 322
+ V + V + +R+GE++GL GLVG+GR+EL++ LFG R G++ Y + +
Sbjct: 262 RLEQVKAPGVRQPVSLSVRSGEIVGLFGLVGAGRSELMKGLFGGSRITGGQV--YIDGEA 319
Query: 323 VQQARKGWRSPMQAIRAGIGLVTEDRKSQGLLLTQSIRVNATLSDLGAISRAGW-LQRAK 381
+ R P QAI+AG+ L EDRK++G++ S+R N +S AG + A
Sbjct: 320 IDI-----RKPAQAIQAGMMLCPEDRKAEGIIPVHSVRDNINISARRKHILAGCVINNAW 374
Query: 382 ERGIAQKLVELLRIRSRSIEQPVATLSGGNQQKVVFARWLHRECKVLLLDEPTRGVDVGA 441
E A + ++ L I++ EQ + LSGGNQQK + RWL E KV+LLDEPTRG+DVGA
Sbjct: 375 EAQNADQHIKSLNIKTPGAEQLIMNLSGGNQQKAILGRWLSEEMKVILLDEPTRGIDVGA 434
Query: 442 RADLYAELDRMTDAGKALLMVSSDLRELMAMCDRIGVMSAGRLVAVFERGEWTEQSLLAA 501
+ ++Y + + +G A++ SSDL E++ + DRI VM G + EQ L+
Sbjct: 435 KHEIYNVIYALAASGVAVVFASSDLPEVLGVADRIVVMREGEIAGELLHEHANEQQALSL 494
Query: 502 A 502
A
Sbjct: 495 A 495
Score = 81.6 bits (200), Expect = 6e-20
Identities = 64/215 (29%), Positives = 111/215 (51%), Gaps = 16/215 (7%)
Query: 20 AAPVLDDVSLVLNAGEVLALTGENGAGKSTLSKIVCGLVQPTRGQMLLDGQPFAPGSRRD 79
A V VSL + +GE++ L G GAG+S L K + G + T GQ+ +DG+ A R+
Sbjct: 268 APGVRQPVSLSVRSGEIVGLFGLVGAGRSELMKGLFGGSRITGGQVYIDGE--AIDIRKP 325
Query: 80 AERLGVRMVM-----QELGLVTTLSVAENLLLDRLPSKTGWIRRG-KLNELAARQLAKIG 133
A+ + M++ + G++ SV +N+ + ++ I G +N Q A
Sbjct: 326 AQAIQAGMMLCPEDRKAEGIIPVHSVRDNI---NISARRKHILAGCVINNAWEAQNADQH 382
Query: 134 MQNIDPATP-----VARLGIGQQQMVEIARNLQDDTRVLVLDEPTAMLTPRETSHLFEQI 188
+++++ TP + L G QQ + R L ++ +V++LDEPT + ++ I
Sbjct: 383 IKSLNIKTPGAEQLIMNLSGGNQQKAILGRWLSEEMKVILLDEPTRGIDVGAKHEIYNVI 442
Query: 189 ELLKARGVAIVYVSHRLEELQRIADRVAVLRDGRL 223
L A GVA+V+ S L E+ +ADR+ V+R+G +
Sbjct: 443 YALAASGVAVVFASSDLPEVLGVADRIVVMREGEI 477
Score = 63.5 bits (153), Expect = 2e-14
Identities = 56/235 (23%), Positives = 100/235 (42%), Gaps = 19/235 (8%)
Query: 271 QVVRDVDIDLRAGEVMGLAGLVGSGRTELVRLLFGADRADRGEITLYENDQPVQQARKGW 330
+ + D+ AG+V L G G+G++ L+++L G G + ++ + +
Sbjct: 21 KALSDISFGCYAGQVHALMGENGAGKSTLLKILSGNYIPTAGSL-------QIRGQQMTF 73
Query: 331 RSPMQAIRAGIGLVTEDRKSQGLLLTQSIRVNATLSDL---GAISRAGWLQRAKERGIAQ 387
+A+ AG+ ++ ++ L+ ++ N L L G I L E G+
Sbjct: 74 NHTTEALNAGVAIIYQELH---LIPEMTVAENIYLGQLPHKGGIVNRSLLN--YEAGLQL 128
Query: 388 KLVELLRIRSRSIEQPVATLSGGNQQKVVFARWLHRECKVLLLDEPTRGVDVGARADLYA 447
K + L E P+ LS G Q V A+ L R K++ DEPT + +L+
Sbjct: 129 KHLGL----DIDPETPLKYLSIGQWQMVEIAKALARNAKIIAFDEPTSSLSAREIENLFR 184
Query: 448 ELDRMTDAGKALLMVSSDLRELMAMCDRIGVMSAGRLVAVFERGEWTEQSLLAAA 502
+ + G+ ++ VS + E+ A+ D I V GR V F+ + L A
Sbjct: 185 VIRELRQEGRVIIYVSHRMEEIFALSDAITVFKDGRYVRTFDNMQEVNHDALVQA 239