Pairwise Alignments

Query, 542 a.a., Ribose ABC transporter, ATP-binding protein RbsA (TC 3.A.1.2.1) from Variovorax sp. SCN45

Subject, 510 a.a., ABC transporter from Klebsiella michiganensis M5al

 Score =  369 bits (948), Expect = e-106
 Identities = 218/513 (42%), Positives = 310/513 (60%), Gaps = 13/513 (2%)

Query: 1   MNDNRAQPVLSLSTMGKDYAAPV-LDDVSLVLNAGEVLALTGENGAGKSTLSKIVCGLVQ 59
           M D  + P+L L  + K Y A + L++V   L AGEV AL GENGAGKSTL KI+ G  Q
Sbjct: 1   MADISSPPLLRLEGISKRYGATLALNNVRFDLFAGEVHALMGENGAGKSTLMKILSGNEQ 60

Query: 60  PTRGQMLLDGQPFAPGSRRDAERLGVRMVMQELGLVTTLSVAENLLLDRLP-SKTGWIRR 118
              G + +DGQ     + RDA + G+ ++ QEL  V  ++VAENL L + P S  G + R
Sbjct: 61  RDSGVIFIDGQAIDIRTPRDARKYGIAIIHQELNTVPDMTVAENLFLGQEPTSFAGILDR 120

Query: 119 GKLNELAARQLAKIGMQNIDPATPVARLGIGQQQMVEIARNLQDDTRVLVLDEPTAMLTP 178
            +++  A  +L +I   +IDP  P+  L IG+QQMVEIAR + ++ +VLVLDEPTA L+ 
Sbjct: 121 KRMHREAKEKLNRIN-ADIDPQAPLGSLSIGRQQMVEIARAVSENAKVLVLDEPTAALSR 179

Query: 179 RETSHLFEQIELLKARGVAIVYVSHRLEELQRIADRVAVLRDGRLVDVRAMAGVRESELV 238
            ET  L+  I  ++  GV +VY+SHR+EE+ ++A+RV V RDG  +    +  V  +++V
Sbjct: 180 AETLQLYRLIAQMRQDGVGMVYISHRMEEVWQLANRVTVFRDGTWIGTENLGNVSTTDIV 239

Query: 239 QRMVGRAVHEHEGRERRTAGPVLLSARGIGRAQVVRDVDIDLRAGEVMGLAGLVGSGRTE 298
           + MVGR + +    E RT G VLL  R +        V  ++ AGEV+ ++GLVGSGRTE
Sbjct: 240 RMMVGRQIVDLYQHEPRTPGDVLLEVRDLA-GSATGPVSFEVSAGEVVSMSGLVGSGRTE 298

Query: 299 LVRLLFGADRADRGEITLY-ENDQPVQQARKGWRSPMQAIRAGIGLVTEDRKSQGLLLTQ 357
           + RLLFGAD   +G + L     QP          P  AI  GIG+VTEDRK+QGL L  
Sbjct: 299 VARLLFGADPRSQGSVRLAGRESQP--------SDPTAAIADGIGMVTEDRKTQGLFLGH 350

Query: 358 SIRVNATLSDLGAISRAGWLQRAKERGIAQKLVELLRIRSRSIEQPVATLSGGNQQKVVF 417
           S+  N  +S L      G ++R   R    + +  LR+R  ++E PV+ LSGGNQQK   
Sbjct: 351 SVEHNIDISSLDNFVAGGVVKRKTIRAAVLEQMRRLRLRENAVELPVSALSGGNQQKAAL 410

Query: 418 ARWLHRECKVLLLDEPTRGVDVGARADLYAELDRMTDAGKALLMVSSDLRELMAMCDRIG 477
           ARWL R+ ++L+LDEPTRGVD+GA+ ++Y  +DR+  AGKA+L++SSDL E + + DR+ 
Sbjct: 411 ARWLLRDSRLLILDEPTRGVDIGAKREIYELIDRLARAGKAILVISSDLPEAIGISDRVL 470

Query: 478 VMSAGRLVAVFERGEWTEQSLLAAAFSDATGRA 510
           VM  GR+V        TE+ ++  A    T ++
Sbjct: 471 VMRGGRIVHQLPSCSATEEEVMLHATGTFTSQS 503