Pairwise Alignments

Query, 329 a.a., Ribose ABC transporter, permease protein RbsC (TC 3.A.1.2.1) from Variovorax sp. SCN45

Subject, 331 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  193 bits (491), Expect = 4e-54
 Identities = 109/296 (36%), Positives = 171/296 (57%), Gaps = 4/296 (1%)

Query: 25  GLTVVLVGMIALFGSLSEYFLTRETFVSIANEIPALA-VMAVGMTFVLIIAGIDLSVGSV 83
           G   + + ++A+    S+ FLTR   +++  ++ + A +MAVGM FV++  GIDLSVGSV
Sbjct: 27  GTLAIFLVLVAVATWWSDSFLTRGNLLNVLRQVASTAGIMAVGMLFVILTRGIDLSVGSV 86

Query: 84  LALSAAVTAAAILEWKLSVPLAAVLGLATGLICGTVTGAVSVAWRLPSFIVSLGMLEAVR 143
           +AL + +T                L L  G  CG VTG      RLPSF++SL M+   R
Sbjct: 87  MALGSVLTGYFCAMLGYGTGATIFLVLLCGAACGLVTGGFIAYLRLPSFVMSLAMMAVAR 146

Query: 144 GGAYLVTDSRTQYVGDA---ISGLAAPWIGGISAAFVLAVVLVVIGQMVLTRTVFGRHVV 200
           G + ++++ R   + DA    S   + ++ GI    +L   + + G +VL  T FGR + 
Sbjct: 147 GLSLIISEGRPIPLSDAGAAFSSFGSGFVLGIPQPVILMFAIYIAGGVVLNFTRFGRVIT 206

Query: 201 GIGTNEEAMRLAGVDPRPVRIIVFAVTGLLAGLAGLMQSARLEAADPNAGVGIELQVIAA 260
            IG+NEEA+RL+G+      + V+ ++GLLAGLAG++ ++R        G+G EL VIAA
Sbjct: 207 AIGSNEEAVRLSGIAVPRYIVAVYVISGLLAGLAGIIAASRTGVGSAQVGIGAELNVIAA 266

Query: 261 VVIGGTSLMGGRGSVVNTFFGVLIIAVLEAGLAQVGASEPSKRIITGAVIVVAVII 316
           VVIGG SLMGG+G V+NT  G L++ ++   +   G     +++  GA+IVVA+++
Sbjct: 267 VVIGGASLMGGKGGVINTLLGALVMGIITNIMNLAGVPGYHQQVYMGAIIVVAMLL 322