Pairwise Alignments

Query, 365 a.a., Ribose operon repressor from Variovorax sp. SCN45

Subject, 335 a.a., DNA-binding transcriptional regulator GalS from Vibrio cholerae E7946 ATCC 55056

 Score =  167 bits (423), Expect = 4e-46
 Identities = 110/337 (32%), Positives = 177/337 (52%), Gaps = 6/337 (1%)

Query: 1   MATIKDVALQAEVSVTTVSHVVNDTRHVSAKVRERVELAIRELGYVPNAMARSLKSNTTS 60
           MATIKDVA +A VSV TVS V+N +   S    + V  A+ +LGY PNA AR+L + +T+
Sbjct: 1   MATIKDVAREAGVSVATVSRVINKSPKASQASIDTVTSAMHKLGYRPNAAARALVNQSTN 60

Query: 61  TLGMLIPNSSNPYFAEIVRIVEDRCFGAGYTLVLCNTDDEPHRQSVYLQVLAERRIDGLI 120
           T+G+L+ + S+P+F  +V+ V+      G  L++ N       +   L++L   R D L+
Sbjct: 61  TIGVLVSDVSDPFFGTLVKAVDTVAHREGKHLLIGNGYHRAEEERRALELLINSRCDALV 120

Query: 121 VVLTGTGDDDALVKQLHGLRVPTVLVDREIADPACDLVETAHMQGGLLAVRHLLSLGHKR 180
           +      +++ L++  + ++   VL++R I   A   +   + +G  LA   L+  GH+ 
Sbjct: 121 IHSKALPNEE-LIEYANEVKT-LVLINRHIPQLADRCISLDNQKGAYLATDFLIRQGHRN 178

Query: 181 IACIGGQAGVMPSEQRIEGWRMALAEAGATPDIANGDALLWRGGFTSQGGYEAMHAILRT 240
           IACI     +  ++QRI G++ AL E G    I    + + +    S+GG +AM  +L  
Sbjct: 179 IACISSSHQIEDADQRIAGYQQALNEHG----ITLSSSYIEKASPDSEGGEQAMTNLLVK 234

Query: 241 ERKPSAVFVCNDLMAIGALRAAHESGVRVPDDLSIVGFDDIELSAYTSPPLTTVAQPKER 300
               +AV   ND MA GAL    E+G  VP+ +S++GFDD  +S Y  P LTTV  P + 
Sbjct: 235 SLPFTAVVAYNDNMAAGALLVLEENGHSVPEHVSVIGFDDALISRYLRPRLTTVRYPIQL 294

Query: 301 IGAMAVDMLLEQMGGKRRDARKVVLQPELRVRASTAR 337
           +   A  + L       R+   ++  P +  R S A+
Sbjct: 295 MAEKATQLALALATDAPRENDPMIFSPTIVRRDSVAQ 331