Pairwise Alignments

Query, 365 a.a., Ribose operon repressor from Variovorax sp. SCN45

Subject, 336 a.a., PurR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  253 bits (647), Expect = 4e-72
 Identities = 136/329 (41%), Positives = 205/329 (62%), Gaps = 5/329 (1%)

Query: 1   MATIKDVALQAEVSVTTVSHVVNDTRHVSAKVRERVELAIRELGYVPNAMARSLKSNTTS 60
           MATIKDVA  A VS TTVSHV+N TR V+   +E+V  A+++L Y P+A+ARSLK NTT 
Sbjct: 1   MATIKDVARLAGVSTTTVSHVINKTRFVAETTQEKVMEAVKQLNYAPSAVARSLKCNTTR 60

Query: 61  TLGMLIPNSSNPYFAEIVRIVEDRCFGAGYTLVLCNTDDEPHRQSVYLQVLAERRIDGLI 120
           T+GML+  S+N +F+E++  VE  C+  GYTL+LCNT     +Q  Y+++LAE+R+DG++
Sbjct: 61  TIGMLVTQSTNLFFSEVIDGVESYCYRQGYTLILCNTGGIYEKQRDYIRMLAEKRVDGIL 120

Query: 121 VVLTGTGDDDALVKQLHGLRVPTVLVDREIADPACDLVETAHMQGGLLAVRHLLSLGHKR 180
           V+ +    +   +   H   +P V++D        D +     +GG LA ++L   GH  
Sbjct: 121 VMCSDLTQELQDMLDAH-KDIPKVVMDWGPETSHADKIIDNSEEGGYLATKYLTDRGHTE 179

Query: 181 IACIGGQAGVMPSEQRIEGWRMALAEAGATPDIANGDALLWRGGFTSQGGYEAMHAILRT 240
           IAC+ G       ++RI+G+R A+AEA  T    N D +L  G F       A   I+  
Sbjct: 180 IACLSGHFVKAACQERIQGFRRAMAEAKLT---VNEDWIL-EGNFECDTAVLAADKIIAM 235

Query: 241 ERKPSAVFVCNDLMAIGALRAAHESGVRVPDDLSIVGFDDIELSAYTSPPLTTVAQPKER 300
           +++P+AVF  ND MA+G +    + G+R+P+D+S++G+D+IEL+ Y SPPLTTV QPK R
Sbjct: 236 DKRPTAVFCFNDTMALGLMSRLQQKGIRIPEDMSVIGYDNIELAEYFSPPLTTVHQPKRR 295

Query: 301 IGAMAVDMLLEQMGGKRRDARKVVLQPEL 329
           +G  A ++LLE++  K  + R   + PE+
Sbjct: 296 VGKNAFEILLERIKDKEHERRIFEMHPEI 324