Pairwise Alignments

Query, 365 a.a., Ribose operon repressor from Variovorax sp. SCN45

Subject, 344 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  186 bits (471), Expect = 1e-51
 Identities = 116/336 (34%), Positives = 186/336 (55%), Gaps = 7/336 (2%)

Query: 1   MATIKDVALQAEVSVTTVSHVVNDTRHVSAKVRERVELAIRELGYVPNAMARSLKSNTTS 60
           MATI DV   A VS  TVS V+N+T  V A+ RE V  A+++LGY PN++A++L +NTT+
Sbjct: 10  MATINDVCKLAGVSKATVSRVLNETGQVKAQTREAVLAAMQQLGYQPNSLAQALATNTTN 69

Query: 61  TLGMLIPNSSNPYFAEIVRIVEDRCFGAGYTLVLCNTDDEPHRQSVYLQVLAERRIDGLI 120
           ++G+++P+  + YF  I+   E     AG  L++ N+ +    +   +  LA +R D ++
Sbjct: 70  SIGLVLPHFESSYFGSILFEAEQGAQKAGKKLLVMNSKNSEQGEKEAVATLAAQRCDAIL 129

Query: 121 VVLTGTGDDDAL-VKQLHGLRVPTVLVDREIADPACDLVETAHMQGGLLAVRHLLSLGHK 179
           +      +   L ++Q H    P V+++R +  P          Q   LA++HLL+LGH+
Sbjct: 130 LYSRHLNEVQLLELQQQH--PSPLVILNRRLHHPQLHSFGLDQTQIAQLAMQHLLNLGHR 187

Query: 180 RIACIGGQAGVMPSEQRIEGWRMALAEAGATPDIANGDALLWRGGFTSQGGYEAMHAILR 239
           +IACI         + R + ++ AL E G    I    +L+  G  T  GGY+AM  +L+
Sbjct: 188 QIACITSPLVSETGKIRYQVYQQALHEQG----IELSSSLVIEGDNTLLGGYQAMQQLLQ 243

Query: 240 TERKPSAVFVCNDLMAIGALRAAHESGVRVPDDLSIVGFDDIELSAYTSPPLTTVAQPKE 299
                +AVF CND MA+GA+RA HE G+ VP  +SI+G D+   +A+  P L++V+ P  
Sbjct: 244 QGISMTAVFACNDDMALGAMRAMHEHGIHVPKQVSIIGIDNEPAAAFAIPSLSSVSLPIG 303

Query: 300 RIGAMAVDMLLEQMGGKRRDARKVVLQPELRVRAST 335
            +   A+ + +E    K +DA+  + Q  L  R ST
Sbjct: 304 ELTQQAISLAVEIANKKPQDAQHRLYQGSLIAREST 339